Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03992 ATGCCACAGGGCAATGCCGCCGCTGCTCTATACGACCACAGTGCCGCCCTGCACAACGATGCCGGCGACGCCGTCATGGCGCGGTGGCTTCAGTCCGCCGGCTTGCAGCATCTGGCCTCTCCCGTCGCTTCATCTGGCATCGATCATCGCCTCCTCCCCAACCTTCTCATGCAGGGTTATGGAGCACAGTCTGCTGAAGAGAAGCAAAGGCTTGTAAAGTTAATGAGAAACCTCAATTTTAATGGGGAGTCTGGTTCAGAGCCATATACGCCCACCACCCAAACTTTAGGTGGTGGAGTGGCTGCATCGGATGGGTTTTATTCTCCTGAGTTCAGGGGGGATTTTGGAGCTGGGCTTTTGGATCTTCATGCTATGGATGATACAGAGCTTTTGTCTGAGCATGTTATTTCAGAACCTTTTGAACCATCACCCTTCATGGCCGGAGATACTAGGGCATTTGAAGATGATTTCAATCCAATTAACAGCAAGCTGGAAAGAGAAGTAGATGCTGATGCATCAATTTCTTTACCTATGAATGAGAAAGAGAATAGTACAAGGGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTTTAAACAAGAAGGAGCTTGCTAAGAAGGAGGATGATATTGTAACTGTATCTGACAATGCATATTTGACAGTCCATGAACCCAAACTAAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTTTTTGATGAGCGTGTTACCAATGATGAAGTATACCGAGGTACAGTTGAACCAATTATTCCTACAATTTTTGAACGAACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCTTTACCACTCAGAGCTGCAGAAGACCTTGTTCGACAGCTGCATCAGCCAGTTTACCGGAATCAGAAATTTAAATTATGGCTTAGCTACTTTGAGATATATGGTGGAAAACTATTTGATCTTCTTAGTGACAGAAAGTGGGTATTTCTTTCCTTACATATAATACACTGGGTGTATATTATTTAA 1065 0.4366 MPQGNAAAALYDHSAALHNDAGDAVMARWLQSAGLQHLASPVASSGIDHRLLPNLLMQGYGAQSAEEKQRLVKLMRNLNFNGESGSEPYTPTTQTLGGGVAASDGFYSPEFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMAGDTRAFEDDFNPINSKLEREVDADASISLPMNEKENSTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVSDNAYLTVHEPKLKVDLTAYVEKHEFCFDAVFDERVTNDEVYRGTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHQPVYRNQKFKLWLSYFEIYGGKLFDLLSDRKWVFLSLHIIHWVYII. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03992 354 ProSiteProfiles Kinesin motor domain profile. 192 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g03992 354 Pfam Kinesin motor domain 198 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g03992 354 PANTHER KINESIN-RELATED PROTEIN 6 18 342 IPR027640 GO:0003777|GO:0007018
Seca6g03992 354 Gene3D Kinesin motor domain 168 350 IPR036961 -
Seca6g03992 354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 352 IPR027417 -
Seca6g03992 354 SMART kinesin_4 190 354 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03992 Seca-Chr6 107604341 107608294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03992 184 347 Calmodulin-binding Proteins AT5G65930 33.529 6.30e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03992 K10393 - gmx:100800014 597.43