Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03991 ATGGTTGTTTATTACATTATAAATAGGAAACTTTGCATGAGGGAAGATGGACGGCAGCAAGTTTGCATTGTAGGACTGCAAGAATTTGAAGTTTCTGACGTACAAATTGTCAAAGAATTCATTGAAAAGGGAAATGCTGCAAGAAGTACAGGATCCACTGGTGCTAACGAGGAGTCCTCCAGGTCACATGCTATTTTACAACTGGCTGTAAAGAAACACAGTGAGGTGAAAGAGAGCAAGCGGAATAATGATGGGAATGAGGCAAGAAGTGGGAAGGTTGTGGGAAAGATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGATAATGATCGTCAGACACGGATTGAAGGAGCAGAAATCAATAAGAGCCTTTTGGCTTTGAAGGAATGCATTCGTGCTTTAGACAATGACCAGATTCATATTCCATTTCGGGGAAGCAAACTTACAGAAGTGCTTCGTGACTCCTTTGTAGGCAATTCAAAGACTGTTATGATCTCTTGTATATCTCCAGGTGCCGGGTCTTGTGAACACACACTTAACACCTTAAGATATGCTGATCGGGTTAAAAGTCTATCCAAAAGTGGAAATCCTAGAAAAGACCAGGTCCCAAATTCTGTACCACAAACTAGCAAGGAAGTTTCATCCATATCATCCCTTCCAGCTAGTGCTGGTTTAGAAGATTTTAATGATCAACGTCAAGAGAAAACAATGGATATGGGCAGGAAACTTGTTGAAAAGGAAAGTTCCTTGTACAGCTCTGCTGCTGATGTTGACAAACAGTCATCAAGTGTCTCTTCAAGTTACCTATTAAATGGCCGAGAGGAAAAAAACCAAGGTTTGGCTTCTGCTTCAGTTGACAGGGAGAAGGTTGAAGTGAAGAACTCATACAGTGGTTCTAACAGTCAAAAGATGAACTCTTATTCACAAAATGATACGGTTGAGAAATTGCAAAAGGTGTCTCCCCCACGCAGAAAAGGTTCTAAGGATGTTGACAAACAGTCATCAAGTGTTTCTTCAAGTTACCTATTAAATGGCCGAGAGGAAAAAAACCAAGGTTTGGCTTCTGCTTCAATTGACAGGGAGAAGGTTGAAGTGAAGAACTCATACAATGATTCTAACAGTCAAAAGATGAACTCTTCACAAAATGATGCGGTTGAGAAATTGCAAAAGGTGTCTCCCCCACGCAGAAAAGGTTCTAAGGATGAAAAGTCTGAAAGGCCTGCAAACTGGATGAAAAGGGATGCCAATGGTTCTGATCTCTTCACGGCTAGCTCCAAGCAGCAGACAATGGGGAATTATAACACTGTTACAGCTGGGTCCAGGCTTTATGAAGCAGAATCCTCTCCTGACGGGAATATCAGTGCAGTACTCGAGGAAGAAGAAGCCTTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTCTTGGCCGAAGTGGACCAACCAGGAAGCCTTATTGACAACTATGTAACCCAATTGAGCTTTGTGCTTTCTCGCAAAGCAGCTAGTCTCGTGGGTCTGCAAGCTCGCCTTGCAAGATTCCAACATCGACTAAAAGAACAGGAGATTTTAAGTAGAAAAAGAGTTCCCCGTTAA 1638 0.4176 MVVYYIINRKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLAVKKHSEVKESKRNNDGNEARSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPGAGSCEHTLNTLRYADRVKSLSKSGNPRKDQVPNSVPQTSKEVSSISSLPASAGLEDFNDQRQEKTMDMGRKLVEKESSLYSSAADVDKQSSSVSSSYLLNGREEKNQGLASASVDREKVEVKNSYSGSNSQKMNSYSQNDTVEKLQKVSPPRRKGSKDVDKQSSSVSSSYLLNGREEKNQGLASASIDREKVEVKNSYNDSNSQKMNSSQNDAVEKLQKVSPPRRKGSKDEKSERPANWMKRDANGSDLFTASSKQQTMGNYNTVTAGSRLYEAESSPDGNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVGLQARLARFQHRLKEQEILSRKRVPR. 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03991 545 MobiDBLite consensus disorder prediction 256 421 - -
Seca6g03991 545 MobiDBLite consensus disorder prediction 394 417 - -
Seca6g03991 545 FunFam Kinesin-like protein 96 155 - -
Seca6g03991 545 Gene3D Kinesin motor domain 6 195 IPR036961 -
Seca6g03991 545 PANTHER KINESIN-RELATED PROTEIN 6 9 341 IPR027640 GO:0003777|GO:0007018
Seca6g03991 545 SMART kinesin_4 2 202 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g03991 545 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 196 IPR027417 -
Seca6g03991 545 Coils Coil 518 538 - -
Seca6g03991 545 MobiDBLite consensus disorder prediction 337 351 - -
Seca6g03991 545 MobiDBLite consensus disorder prediction 373 392 - -
Seca6g03991 545 MobiDBLite consensus disorder prediction 258 278 - -
Seca6g03991 545 PRINTS Kinesin heavy chain signature 146 167 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g03991 545 PRINTS Kinesin heavy chain signature 96 114 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g03991 545 PRINTS Kinesin heavy chain signature 53 70 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g03991 545 Pfam Kinesin motor domain 9 195 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g03991 545 Coils Coil 462 493 - -
Seca6g03991 545 MobiDBLite consensus disorder prediction 322 336 - -
Seca6g03991 545 MobiDBLite consensus disorder prediction 299 321 - -
Seca6g03991 545 MobiDBLite consensus disorder prediction 358 372 - -
Seca6g03991 545 ProSiteProfiles Kinesin motor domain profile. 1 196 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca6g03991 545 ProSitePatterns Kinesin motor domain signature. 95 106 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca6g03991 545 MobiDBLite consensus disorder prediction 200 229 - -
Seca6g03991 545 MobiDBLite consensus disorder prediction 196 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03991 Seca-Chr6 107601014 107603992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03991 10 196 Calmodulin-binding Proteins AT5G65930 36.898 3.21e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03991 K10393 - gmx:100819897 759.985