Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03985 ATGGAGGATTCAGGGCTGCAGAAGCAAAAGCAGCGAGAGTTTGATTTGGCATGGGTGGGTGAATTGTCTTCGGCTCGTTCTGCTGCTTCGCCAGGGGTGGCTCGCTTCTCTGTCGACCGCCTACAAATTCAGCTTGAATCTAAGCAGACTGTTTACAACGTTGATCTTCCAGCTGTTCAGCTATTCAGATTAGGTCCTGTTCAATCGTTTTGCATGGTTGAAGGGTCTGATGCTGGCAAACAGACATCGTATTCCAGGGGATTTGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGACCTTCCATTGTGTACTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGAGGAAACTTACCAAATGGAACTAATGTGATAACTTCTAAAAGCAAATTTGACGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTTCATTATTATGGCCAACTTCTGCATCAGCAAAATATGTTACAGGACTATGTGAGGACAGGAACATATTATGCTGCTGTTATTGAGAATCGCACTGATTTCTTTGGTCGAGTAGTAGTAGATGTTGGTGCTGGTAGTGGTATTTTATCATTATTTGCTGCTCAGGCAGGTGCAAAACATGTTTATGCCGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGGAACCCAATACTAGGTCAACGGATTACAGTTATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAAAAAGCAGATATTCTGATCTCTGAGCCCATGGGAACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACCCCTAATGGGAAAATGTTTCCTACAGTGGGAAGGATTCACATGGCACCTTTCAGCGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCTTGTTCTGGCAGCAGCAAAACTATTATGGTGTTAATTTGACACCCTTACACGGGACTGCCTTTCAAGGATACTTTTCTCAGCCTGTGGTAGATGCTTTTGATCCAAGGTTGTTAATAGCTCCTCCTATGTTCCATGTGATAGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAGATTGACATTCCTCTCAGATTTATATCAAATGTGGGTGCCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCGAAGGTGGCTTACCACGGCCCCTGGTTCACCGATAACTCATTGGTATCAGTTACGCTGTGTTCTCTCCCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGCAGGCTGCACTTGATTGCCCACAATGCACAGAGTTATACAATCTATTTAACTTTGTCAGCTAAAATGTGGGGGCCTGGTGCCGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTGAAGGAACCTTACTATAGAATGTCTCAACCACAAGCTTATCCATTAAGCCAAGATCAGCAATCACAACCACTTTTGCAGACACAGGATGTACACATCCAATCTCAGGATTTGGATGAAACTGAGATAATTCAACAGCCTTCGCCTAAGTCGTGTGCTCAGGTTGACTCACTCATGCACAATGCATAA 1611 0.424 MEDSGLQKQKQREFDLAWVGELSSARSAASPGVARFSVDRLQIQLESKQTVYNVDLPAVQLFRLGPVQSFCMVEGSDAGKQTSYSRGFAIQFRNEEESETFHCVLQQWKKEFNVQGGNLPNGTNVITSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRTDFFGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPNGKMFPTVGRIHMAPFSDEYLFVEIANKALFWQQQNYYGVNLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVIDFTKIKEEELYEIDIPLRFISNVGARVHGLACWFDVLFNGSTVRRWLTTAPGSPITHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLSQDQQSQPLLQTQDVHIQSQDLDETEIIQQPSPKSCAQVDSLMHNA. 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03985 536 Gene3D - 286 494 - -
Seca6g03985 536 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 115 467 IPR025799 GO:0016274|GO:0018216
Seca6g03985 536 FunFam Probable histone-arginine methyltransferase CARM1 124 284 - -
Seca6g03985 536 FunFam Probable histone-arginine methyltransferase CARM1 286 494 - -
Seca6g03985 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 458 IPR029063 -
Seca6g03985 536 CDD AdoMet_MTases 183 286 - -
Seca6g03985 536 Gene3D Vaccinia Virus protein VP39 123 284 IPR029063 -
Seca6g03985 536 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 137 452 IPR025799 GO:0016274|GO:0018216
Seca6g03985 536 Pfam Ribosomal protein L11 methyltransferase (PrmA) 180 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03985 Seca-Chr6 107516361 107525775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03985 144 433 C2H2 Transcription Factor Family AT3G12270 33.442 1.90e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03985 K05931 - gmx:100818828 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03985 6 107516361 107525775 Seca6g03985 6 107516361 107525775 ECH
Seca12g00335 12 2970692 2974921 Seca6g03985 6 107516361 107525775 PCT