Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03940 ATGAGCATGTCCAAGTACTCTTCCTTCTCATTGCTACTTCTTTTGGTTTTTTACACCATTTCAGCCTCAGCCGAACCTCATGAAAACTTTGAAGTTGAAGATGAGCCATTCACTTCCTCCCCTGGTGACACTGTCTTCACTCTTCAAGTCCAAACATTAGAGGACACCACCTTGGATGATCTCCTATCCTTTGGTTACTACCGAAAAAGCTGTCCCCAATTTGAGTCCATCCTACACAGAAAAGTGAAAGAATGGATTCAGAAGGATTACACTTTAGCACCTAGTCTCCTGAGGCTGCATTTCCATGATTGCTCTGTCAGGGGGTGTGATGGGTCTATTCTGCTGAACCATGATGGAAGTGAGAGGAGAGCACAGGCAAGCAAGACACTTAGAGGGTTTGAAGTGATAGATGATATCAAGGCAGAGTTAGAGAAGAAATGCCCCAAAATGGTGTCTTGTGCAGACATTCTAACTGCAGCTGCAAGGGATGCCACAGTTGAGATGGGTGGACCATATTGGGCAGTCCCTTATGGAAGGAAAGATGGGAGGGTCTCAATTGATAAGGAAGCTGAAATGATTCCTATGGGTCATGAAAACATTACTTCCTTGATTGAGTTTTTTCAATCCAAAGGCCTAACTGTTCTTGAGTTGGTTGTTCTCTCAGGGGCTCATACTATTGGAAGGACTACTTGTGAATCTATTCAATATAGGCTGTACAATTACCAAGGAACAGGCAAAGCAGACCAATCCATAGATCTCAAATATTTGAACTTCTTGCAAAGGAAGTGTAGATGGGCCTCAGAGTATGTGGATCTTGATGCTATAACGCCTAAGGCCTTTGACCATATGTATTATATAAATCTTAAGAAGAAAATGGGATTGTTATCCACAGATCAGTTGTTGTATTCTGATCCAAGGACTTCTCCCCTTGTTTCTGCATTGGCTACCACACCCTCTATTTTCCAGCACCAATTTGCGGTGTCAATGGCAAAGTTTGGTGTCATTGAAGTTCTCACGGGACAGGATGGTGATGGAGAAATCAGGACCAACTGCAATTTTGTCAATGCTTATTGA 1074 0.4283 MSMSKYSSFSLLLLLVFYTISASAEPHENFEVEDEPFTSSPGDTVFTLQVQTLEDTTLDDLLSFGYYRKSCPQFESILHRKVKEWIQKDYTLAPSLLRLHFHDCSVRGCDGSILLNHDGSERRAQASKTLRGFEVIDDIKAELEKKCPKMVSCADILTAAARDATVEMGGPYWAVPYGRKDGRVSIDKEAEMIPMGHENITSLIEFFQSKGLTVLELVVLSGAHTIGRTTCESIQYRLYNYQGTGKADQSIDLKYLNFLQRKCRWASEYVDLDAITPKAFDHMYYINLKKKMGLLSTDQLLYSDPRTSPLVSALATTPSIFQHQFAVSMAKFGVIEVLTGQDGDGEIRTNCNFVNAY. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03940 357 Gene3D - 65 355 - -
Seca6g03940 357 ProSiteProfiles Plant heme peroxidase family profile. 61 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 ProSitePatterns Peroxidases proximal heme-ligand signature. 216 226 IPR019793 -
Seca6g03940 357 CDD secretory_peroxidase 62 354 IPR033905 GO:0004601|GO:0042744
Seca6g03940 357 ProSitePatterns Peroxidases active site signature. 93 104 IPR019794 GO:0004601
Seca6g03940 357 FunFam Peroxidase 65 207 - -
Seca6g03940 357 PANTHER PEROXIDASE 25-RELATED 22 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 FunFam Peroxidase 194 332 - -
Seca6g03940 357 SUPERFAMILY Heme-dependent peroxidases 62 355 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Plant peroxidase signature 150 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Plant peroxidase signature 327 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Plant peroxidase signature 215 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Plant peroxidase signature 271 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Plant peroxidase signature 169 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Plant peroxidase signature 131 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Plant peroxidase signature 287 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Plant peroxidase signature 71 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Plant peroxidase signature 95 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 Pfam Peroxidase 80 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 Gene3D Peroxidase, domain 2 194 332 - -
Seca6g03940 357 PRINTS Haem peroxidase superfamily signature 216 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Haem peroxidase superfamily signature 273 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Haem peroxidase superfamily signature 169 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Haem peroxidase superfamily signature 151 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca6g03940 357 PRINTS Haem peroxidase superfamily signature 93 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03940 Seca-Chr6 107116924 107119574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03940 58 356 Peroxidase AT1G30870 60.000 1.26e-134 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03940 K00430 - gmx:100798229 558.91