Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03935 ATGGCACCCTTGTTGTATTACTCCCTCTTTTCTCTAGCTTTCATTCTCACTCTCAAGATTTTGCTCCAAAAGAGGTTTAAAAACCTACCACCAGGCCCACCAACCGCCCCCATCATCGGTAACCTCCACCACCTCAAACAGCCTCTCCACCGCACCCTGTCAACCCTCTCCCAAAAATACGGCGACATCATGACCCTCTGGTTCGGGTCACGCCTCGTGGTGGTTGTCTCTTCCCCTTCCTTAGTCCAAGAATGCTTCTCCAAAAACGACGTCGTTTTAGCCAACCGTCCGCGTTTCCTCACGGGGAAGTACATCTTCTACAACTACACCACCCTGGGTTCCGCCTCGTACGGCGACCACTGGCGCAACCTCCGCCGCATCACCACCATCGACGTCCTCTCCAACCACCGCCTCAACTCCTTCTCGGGAATCCGAAAGGACGAGACGAAGAGGCTCGTACACAAGCTAGGCCAAGACAGTAGCGCTAGCGGTGATTTTGCGAAGGTGGAATTGAGGTCGAGGTTGACGGAGATGACGTTCAACGCGATGATGAGGATGATATCGGGGAAGAGATATTACGGTGAGGATTGTGATGTGACGGATGTGGAGGAAGCGAAGCAGTTCAGGGAGATAATATCGGAGATGCTGTCACTGTTAGGGGCTAACAATAAGAGTGACTTTTTGCCTTTGCTTAGGCTGTTTGACTTTGAGGATTTGGAGAAGAGGCTCAAGAGGATTGCAAAGAGAGCTGATGCGTTCTTGCAGGGACTCATTGAAGAGCATCGGAATGGGAAACACAGTGATGCAGCAGCGGACACCATGATTGACCATCTCTTGAAACTCAGCGAGTCTCAGCCTGAGTACTATTCCGATCACATGATCAAAGGTCTCATTCAGGCTATGCTTCTAGCTGGAACAGACACCTCAGCAGTGACAATAGAGTGGGTGATGTCTGAATTGTTGAACCATCCAGAAGTATTGCAAAAGGCAAAGGATGAATTAGACACACACATTGGAAAAGACCGATTGGTAGATGAGCAAGATTTGTCAAAACTCCCATACCTTCAAAACATTATATCTGAAACACTTCGATTGCATCCTCCAGCTCCATTGCTATTACCACATTATTCTTCAGAAGATTGTACTGTTGGGGGATTCAATATTCCACGAGACACAATAGTGTTGACTAATGCATGGCTCATTCATAGAGATCCAAAACTTTGGAGTGATCCCACAAGTTTTAAGCCGGAGAGATTTGAAAAAGAGGGGGAAGTAAACAAGTTAATTGCCTTCGGGTTAGGAAGAAGAGCCTGTCCTGGACTAGGCTTGGCTCAGCGTACGGTGGGCTTCACTGTGGGGCTATTGATTCAATGCTTTGAATGGGAACGAGAAAGTGAGGAAAAACTTGATATGTCAGAGGACAAAGGGATCACCATGCCAAAGCTAGTTCCATTACAGGCCTTATGTAAAGCAAGACCTGTTGTCAATGATGTTATGAAGTAA 1503 0.4764 MAPLLYYSLFSLAFILTLKILLQKRFKNLPPGPPTAPIIGNLHHLKQPLHRTLSTLSQKYGDIMTLWFGSRLVVVVSSPSLVQECFSKNDVVLANRPRFLTGKYIFYNYTTLGSASYGDHWRNLRRITTIDVLSNHRLNSFSGIRKDETKRLVHKLGQDSSASGDFAKVELRSRLTEMTFNAMMRMISGKRYYGEDCDVTDVEEAKQFREIISEMLSLLGANNKSDFLPLLRLFDFEDLEKRLKRIAKRADAFLQGLIEEHRNGKHSDAAADTMIDHLLKLSESQPEYYSDHMIKGLIQAMLLAGTDTSAVTIEWVMSELLNHPEVLQKAKDELDTHIGKDRLVDEQDLSKLPYLQNIISETLRLHPPAPLLLPHYSSEDCTVGGFNIPRDTIVLTNAWLIHRDPKLWSDPTSFKPERFEKEGEVNKLIAFGLGRRACPGLGLAQRTVGFTVGLLIQCFEWERESEEKLDMSEDKGITMPKLVPLQALCKARPVVNDVMK. 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03935 500 CDD CYP81 61 485 - -
Seca6g03935 500 PANTHER CYTOCHROME P450 82C3-RELATED 13 492 - -
Seca6g03935 500 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 SUPERFAMILY Cytochrome P450 30 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 Pfam Cytochrome P450 30 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 Gene3D Cytochrome P450 22 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03935 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Seca6g03935 500 FunFam Cytochrome P450 family protein 21 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03935 Seca-Chr6 107030387 107033271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03935 9 495 Cytochrome P450 AT4G37370 57.404 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03935 K13260 - ccaj:109806032 761.525