Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03923 ATGTCATTATTGGCAAAACTACGCTGTGTCACTATAGACGTTACCGGCACCCTAATGGCTTACAAAGGGGAGCTTGGTGACTATTATTGCATGGCAGCCAAAGCTGCTGGCCATCCATGCCCAGACTACAAACGTGTACACGAGGGCTTCAAGCTTGCATATAAGGAGATGGCAAAGAAGTATCCATGTTTTGGGTTTGCAGCCAAAATGCCAAACATTGTGTGGTGGAAAACCTGTGTGCGAGATTCTTTTATCAGGGCTGGATATGAATATGATGAGGAGACATTTGAGAAAATTTTCAGACGCATATATGCATCCTTTGGTTCATCTGCTCCATATACTGTCTTTCCAGACTCCCAACCATTTCTTAGATGGCTTCGAGGAAAGGGTCTCAAAGTTGGCATTGTGAGCAATGCAGAGTACCGATATCAAGATGTGATTCTTCCAGCTTTGGGTTTAAATGAGGGATCTGAGTGGGATTTTGGTGTGTTTTCTGGTCTTGAAGGTGTTGAGAAGCCAAACCCAAAAATTTATGAGATAGCACTTGAGAGGGCTGGAAGTATTGCACCTGAAGAAGCCTTACATATCGGGGATAGCATTCGCAAAGACTATGAGCCAGCTAAGAGCATAGGGATGCATGCAATATTGTTGGATAGATTTAAAACACCAGATGCTGAGGAGTGGAGGAAATCTGGGGCAGTTGTTCTTCCTGATTTGTTGGCAGTCCAAGAATGGTTGTCTTCAGAGAAGTCAACTTGCTAG 762 0.4396 MSLLAKLRCVTIDVTGTLMAYKGELGDYYCMAAKAAGHPCPDYKRVHEGFKLAYKEMAKKYPCFGFAAKMPNIVWWKTCVRDSFIRAGYEYDEETFEKIFRRIYASFGSSAPYTVFPDSQPFLRWLRGKGLKVGIVSNAEYRYQDVILPALGLNEGSEWDFGVFSGLEGVEKPNPKIYEIALERAGSIAPEEALHIGDSIRKDYEPAKSIGMHAILLDRFKTPDAEEWRKSGAVVLPDLLAVQEWLSSEKSTC. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03923 253 Gene3D - 23 108 IPR044924 -
Seca6g03923 253 Coils Coil 248 253 - -
Seca6g03923 253 CDD HAD_dREG-2_like 119 244 - -
Seca6g03923 253 Gene3D - 10 221 IPR023214 -
Seca6g03923 253 SUPERFAMILY HAD-like 7 246 IPR036412 -
Seca6g03923 253 PANTHER OS02G0173600 PROTEIN 1 251 - -
Seca6g03923 253 Pfam haloacid dehalogenase-like hydrolase 8 210 - -
Seca6g03923 253 NCBIfam HAD hydrolase, REG-2-like, family IA 8 216 IPR011949 -
Seca6g03923 253 NCBIfam HAD-IA family hydrolase 128 211 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03923 Seca-Chr6 106918048 106921862 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03923 - - gmx:100815659 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03923 6 106918048 106921862 Seca6g03923 6 106918048 106921862 ECH