Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03915 ATGAGAATTATCAAAGATTATAACCAATATGTGATGCGTAATTTGGACCGTGGATATACAAGAAAGGAGCTAGGTGTCAGCTATGTCAAGGAGAAGAGATTGAGAATGAACATGGGACTTAAAAAATTGCGTGAGAGAGTGAAGAAACAGCAGGAGAAGGTGGGAAAAAAGATACAGACAGTAGGAAAATTTGCTGGAATGAACCGTACTGAATGGGTCGAAAATGCGGATCGATTGGTTGCTGGATTTCTTGAGATGTTTGAAGAAGGCTGCCACAAAATGGGGACAGCAATCAGAGACAGAATTCAAGAACGACTGAGGACACAGCAGCTAAAATCTCTTCTTTATGATGAGTGGGATGATGATGAGGATGATGAATTCTATGATGACGAATCTGTAGAATACTACAGCGACTAA 417 0.4029 MRIIKDYNQYVMRNLDRGYTRKELGVSYVKEKRLRMNMGLKKLRERVKKQQEKVGKKIQTVGKFAGMNRTEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLRTQQLKSLLYDEWDDDEDDEFYDDESVEYYSD. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03915 138 Gene3D HUPs 1 89 IPR014729 -
Seca6g03915 138 PANTHER CYTIDYLYLTRANSFERASE 1 133 IPR045049 GO:0004105|GO:0006657
Seca6g03915 138 Coils Coil 40 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03915 Seca-Chr6 106840553 106842120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03915 1 130 Acyl Lipid Metabolism Gene Families AT2G32260 71.538 1.93e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03915 K00968 - lja:Lj6g3v1392580.2 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03915 6 106840553 106842120 Seca6g03915 6 106840553 106842120 ECH