Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03905 ATGGGGAAGTTCCCGAAGTCGAACAAGGCGCGCAGTGATCGTGCTGTAGGGCCGAAGTACCCTAGCAAGGTCATCAAGAAGGACTCTGCCAAGAAGACCGCGAAGAAGTCGCGCGTGAAGGCATTCGTGAAACTCGTCAACTACCAGCACCTCATGCCCACGCGTTACACCCTCGACGTCGATCTTAAGGACGCCGTTAGCCCCGACGTTCTCCACTCAAAGGACAAGAATATCACCGCACTCAAGGAGACCAAGAAGCGCTTCGAGAACGCTTCAAAACCGGCAAGAACCGGTGGTTTTTCACCAAGCTCAGGTTTTACTCTGAGACAATTGATTGAATTTGAGTTGTCTGATGATGGAGCCACCAGGCCATGGGACGACGGGGCCGCGACTGGACGTTTATCCGCGGAGTTGCGATTTGTGTCTCCTTTTCTCTAA 438 0.532 MGKFPKSNKARSDRAVGPKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVSPDVLHSKDKNITALKETKKRFENASKPARTGGFSPSSGFTLRQLIEFELSDDGATRPWDDGAATGRLSAELRFVSPFL. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03905 145 Gene3D - 13 101 IPR038655 -
Seca6g03905 145 Pfam Ribosomal L27e protein family 23 93 IPR001141 GO:0003735|GO:0005840|GO:0006412
Seca6g03905 145 PANTHER 60S RIBOSOMAL PROTEIN L27 19 96 IPR001141 GO:0003735|GO:0005840|GO:0006412
Seca6g03905 145 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03905 Seca-Chr6 106746262 106749092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03905 12 100 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 63.542 2.98e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03905 K02901 - gmx:100527246 122.479