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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca6g03865
ATGAAGTATATTCGGAGCAACAGCTTGAAGAGGCTCTTCTCATTTGGAAGACGCAGTTTTGGGGGAGAAAATGATGACAGCGTGGTGGTTACTTCTCCTGAAGAACACCCTCCAAGACCCTTTTGGAAATGCTTCTCTTATGAAGAGTTGTTCCTTGCCACCAATGGCTTCAGCTCAGGAAATTTGGTTGGGAAAGGAGGGTATGCAGAGGTTTACAAGGGAATACTGAATGGTGGTGAAGAAATTGCTGTGAAGAGGCTCACAAGAACTCCAAGGGATGAGAGGAAGGAGAAGGAGTTCCTAACAGAGATTGGTACAATTGGTCATGTGCGCCATTCCAACGTATTGCCTCTTCTGGGGTGTTGTATTGACAATGGACTTTACCTCGTTTTTGAGCTATCCACCGTAGGCTCTGTTGCTTCTCTTATCCATGATGAGAAAAAGCCCCCTCTTGATTGGAAAACAAGGTACAACATAGTTCTTGGGACAGCACGTGGCCTCCACTACTTGCACAAAGGTTGCCAGAGGAGGATCATTCACAGGGACATCAAGGCATCAAACATTCTGCTGACAGCAGATTTTGAGCCACAGATATCTGATTTTGGACTAGCAAAGTGGCTTCCATCTCAGTGGACTCATCATTCAATAGCCCCAATAGAAGGGACATTTGGGCATTTGGCACCTGAGTACTATATGCACGGAGTTGTGGATGAGAAGACAGATGTATTTGCCTTTGGAGTGTTCTTGCTAGAAGTCATCTCAGGGAAGAAACCCGTGGATGGGTCTCACCAAAGCTTGCACAGCTGGGCTAAGCCAATATTGAACAATGGGGAGATAGAAAAGTTGGTAGATCCAAGGCTTGGAGGGGCTTATGATGTGACACAGTTTACTAGACTCGCCTTTGCTGCCTCGCTGTGCATCAGGGCTTCTTCAACTTGGCGACCCACCATGGACGAGGTATTAAATAAAGTAAAATTATGCATTGAGTGA
990
0.4596
MKYIRSNSLKRLFSFGRRSFGGENDDSVVVTSPEEHPPRPFWKCFSYEELFLATNGFSSGNLVGKGGYAEVYKGILNGGEEIAVKRLTRTPRDERKEKEFLTEIGTIGHVRHSNVLPLLGCCIDNGLYLVFELSTVGSVASLIHDEKKPPLDWKTRYNIVLGTARGLHYLHKGCQRRIIHRDIKASNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYMHGVVDEKTDVFAFGVFLLEVISGKKPVDGSHQSLHSWAKPILNNGEIEKLVDPRLGGAYDVTQFTRLAFAASLCIRASSTWRPTMDEVLNKVKLCIE.
330
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca6g03865
329
FunFam
Putative receptor-like serine/threonine-protein kinase
135
327
-
-
Seca6g03865
329
SUPERFAMILY
Protein kinase-like (PK-like)
34
323
IPR011009
-
Seca6g03865
329
ProSiteProfiles
Protein kinase domain profile.
57
326
IPR000719
GO:0004672|GO:0005524|GO:0006468
Seca6g03865
329
SMART
serkin_6
57
328
IPR000719
GO:0004672|GO:0005524|GO:0006468
Seca6g03865
329
Pfam
Protein tyrosine and serine/threonine kinase
60
264
IPR001245
GO:0004672|GO:0006468
Seca6g03865
329
ProSitePatterns
Serine/Threonine protein kinases active-site signature.
178
190
IPR008271
GO:0004672|GO:0006468
Seca6g03865
329
FunFam
Putative receptor-like serine/threonine-protein kinase
24
133
-
-
Seca6g03865
329
ProSitePatterns
Protein kinases ATP-binding region signature.
63
85
IPR017441
GO:0005524
Seca6g03865
329
Gene3D
Phosphorylase Kinase; domain 1
29
132
-
-
Seca6g03865
329
PANTHER
OS08G0249100 PROTEIN
33
322
IPR046958
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca6g03865
Seca-Chr6
106215420
106219124
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca6g03865
45
320
Trihelix Transcription Factor Family
AT1G68690
44.912
3.77e-70
228
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
PK
RLK-Pelle_RLCK-VI
Seca6g03865
PK_Tyr_Ser-Thr
4.9e-40
CL0016
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca6g03865
-
-
gmx:100801765
590.882
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