Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03862 ATGATAGGAAAACGAAGAAGGAAGCCAATGACTAGATCAGAATCACAATTTCTGACAGTGACTATGGATAAATTTCTGAATGATATGGAAAAGGAGAAGCCAATCAGATTTACTGATCAGCAGCTAAGGATTGCAACTGACAACTACTCTTACAAGTTGGGGTCAGGGGGTTTTGGAGCAGTTTATAAAGGAAGTTTTAGTGATGGAACCATGATAGCTGTCAAGGTTCTGCATGGGAGTTCTGACAAGATAATTAATCAGCAGTTTATGGCAGAAGTTGGAACCATTGGAAAAATTCATCATGGTAGGAGAAAAAACCATGATATGAACCTTTCAGAAAGCCAAGAGTGGTTTCCAATGTGGGTTTGGAATAGATTTGATGCTGAACAGTATAAACCAGAATCAAGACCTGTGATGAGTGTTTTGGTGAAAATGTTGGAAGGTTCATTAGAAATTCCCAAGCCTTTGAACCCTTTTCAACACTTGATGGATGGGACTTTCGATGCTCTTCCTTTCCGACCATCACAGATTAATACTGATACAACTACGGATTCTGGCTTTGAAGGTGCTACTCCTATTATGACCAAGTACTACGATATTGAATTAGCCACCGCATCAAATTTAGGCTGCCTCTAG 636 0.3962 MIGKRRRKPMTRSESQFLTVTMDKFLNDMEKEKPIRFTDQQLRIATDNYSYKLGSGGFGAVYKGSFSDGTMIAVKVLHGSSDKIINQQFMAEVGTIGKIHHGRRKNHDMNLSESQEWFPMWVWNRFDAEQYKPESRPVMSVLVKMLEGSLEIPKPLNPFQHLMDGTFDALPFRPSQINTDTTTDSGFEGATPIMTKYYDIELATASNLGCL. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03862 211 Pfam Protein tyrosine and serine/threonine kinase 51 101 IPR001245 GO:0004672|GO:0006468
Seca6g03862 211 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Seca6g03862 211 SUPERFAMILY Protein kinase-like (PK-like) 21 101 IPR011009 -
Seca6g03862 211 Gene3D Phosphorylase Kinase; domain 1 20 103 - -
Seca6g03862 211 PANTHER OS07G0415500 PROTEIN 23 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03862 Seca-Chr6 106197832 106198972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03862 1 101 Receptor kinase-like Gene Family AT1G53420 39.806 2.08e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Seca6g03862 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03862 - - zju:107425178 149.058