Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03854 ATGGAGGGCCAATCAGCTAAACGCAGAAGAGTTTACTCACTTGAACCAAACAAAGTAGTGCAAGCAACATTTACTAGAAATTACATGAACTATTTAGTTCCAGCTTTGATGAAGATCAAGGAAAAGAGTTCTACAGAACATAACAGCTATTGTGATTTTCAGAGTGTTGTCAAGTATGAAGTGGACAAGGCAATGGTGTTCTCAGCTCAAGGTTTTGCATGGAGTAATGCTCTTAAAGTCAAGCTTCAAAGGGATGGAGTCAATGTGAATAGTGGCAGCACTGGCTTTGTTGAAAATAAGGCTGGTGGTGAAGGTTCATCAAAGGTTTGTGACCAAAATGAAATGGTCCTCCCAATGGATTTTTTCTCTTCAAAGTCTGAGGCTAAGAATTTGATGTGTAAGTCTAAGCACAATGATGATGACATGCCACAAATGGGAAAGGATTTAACAGGAGAAAATGATGAAGATGAGGTTATCAATGGGCAGTTGAGGAGCTTAAGAAGGTTGATACCTGGAGGAGAAGAGATGTGTCATGAACAAATGGTGACAGAACTAGAGAGCTATGTAAGTTGTTTGCAAATGCAGGTGGACATTCTTCAATGTCTTGCTCATGAGAGTGAGACAAGTTGA 630 0.3984 MEGQSAKRRRVYSLEPNKVVQATFTRNYMNYLVPALMKIKEKSSTEHNSYCDFQSVVKYEVDKAMVFSAQGFAWSNALKVKLQRDGVNVNSGSTGFVENKAGGEGSSKVCDQNEMVLPMDFFSSKSEAKNLMCKSKHNDDDMPQMGKDLTGENDEDEVINGQLRSLRRLIPGGEEMCHEQMVTELESYVSCLQMQVDILQCLAHESETS. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03854 209 CDD bHLH_AtIBH1_like 148 203 IPR044549 GO:0006355
Seca6g03854 209 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 204 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03854 Seca-Chr6 106097320 106097949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03854 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 46.988 1.67e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03854 - - aprc:113852314 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00774 12 7126839 7127429 Seca6g03854 6 106097320 106097949 PCT