Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03843 ATGGATCCAAGCACTACAATTATTGGACTCTTTACTATAAGCTTACTCTCTCTATATCTTTTCCGTACCTTGAAAAGCACTTCTAAATGTAGAGAAGAAGCTCCATTAGTCTCAGGTGCTTGGCCTATTCTCGGTCACCTTCCACTATTGAATAGTTCCCAAAAAACCCATGTGACTTTGGGTACAATGGCTGATACCTATGGACCCATTTTCACCATCAAGCTTGGTTGCACAAAGGGTTTGGTAATTAGCAACTGGGAAATGGCTAAAGAATGCTTCACCGCTAATGATGTAGCTGTCTCTTCTCGCCCTCAACTTATTGCAATTGACAATTTAACCTATAACAGAGCCTTGCTTGGTTTTGCACCTTATGGCCCATATTGGAGGGAAATACGCAAGATTGCAACTTCAGAGTTCCTCTCCAATCACCGCATTGACTTGATAAGTCATGTTCTTGAGTCCATAGTCCAAACTTCTACCAAAGAGCTATTCCATGTTTGGTCCAATAGACAGGATAAAAATGAAAACTTTGTGTTGGTGGAGTTGATGACGTGGCTGGGTGAGTTGACATTCAACATTGTTCGCCAAATGGTTATAGGGAAGGAATGTTCTACTTCTTTGTATGGTGATGATGAGGAGAGTGATGCTAGTAGGATTGTGAAAGGTTTGAGGGAGTTGATGCATCATTTTGGGGTGTTTACTGTGTCAGATGCTGTTCCTCTTCTGAGATGGTTAGATTTGGGTGGGCATGAGAGAGCAATGAAAGAAACTGCTAAGGAATGGGACATCATGTTAAGTGGTTGGTTAGAGGAGCACCGTCGGAAGTGGACTTCAAGGGAACAAGTTAAAAGCGATCAAGACTTCATGGATGTGATTCTTTCCAGGATCGATGGCAGAATGATTCATGGGCATGATGCAGATTCCATCACCAAAGCCACGACCTTGGCACTAATTGCAGGATCAATTGACCCCACTACTGTTACCCTTACATGGGCAATGTCTTTGATGTTGAATAATCCTAGTACATTGCAAAAAGTAAAAGAAGAACTCCATTTCCAAATTGGATTTGAGAGATTTGTAACTTATTCAGATTTAAATAAGTTAGAATATCTTCAAGCCGTAGTTAAAGAGACACTAAGATTATATCCAGCAAATCCACTCTTATCACCTCGTTCATTTACAGAGGATTGCATTATTGGTGGCTACTATGTCAAAAAAGGAACTCGACTAATTACAAATCTATGGAAGATACACACAGACTCTAATATTTGGTCAGATCCATTTGAGTTCAAGCCAGAAAGGTTCCTTACCACCGATAAAAATGTTGATGTTAAGGGTCACCATTTTGAATTGTTTCCATTTGGAAGTGGTAGAAGGATGTGTCCTGGAATCTCCTTCAGCCTTCGAATTATTCATTTGATTCTAGCGAACTTTCTACACTCCTTTGATATTGCAGTTCCATCAAGTGAAGCTATTGATATGACTGAATCTGTTGGATTAACCAACATTAAAGCTACTCCGCTTGAGGTGCTTGTTAAGCCACGTTTGTCTCCTAGACTCTATGAAAAGTAA 1572 0.402 MDPSTTIIGLFTISLLSLYLFRTLKSTSKCREEAPLVSGAWPILGHLPLLNSSQKTHVTLGTMADTYGPIFTIKLGCTKGLVISNWEMAKECFTANDVAVSSRPQLIAIDNLTYNRALLGFAPYGPYWREIRKIATSEFLSNHRIDLISHVLESIVQTSTKELFHVWSNRQDKNENFVLVELMTWLGELTFNIVRQMVIGKECSTSLYGDDEESDASRIVKGLRELMHHFGVFTVSDAVPLLRWLDLGGHERAMKETAKEWDIMLSGWLEEHRRKWTSREQVKSDQDFMDVILSRIDGRMIHGHDADSITKATTLALIAGSIDPTTVTLTWAMSLMLNNPSTLQKVKEELHFQIGFERFVTYSDLNKLEYLQAVVKETLRLYPANPLLSPRSFTEDCIIGGYYVKKGTRLITNLWKIHTDSNIWSDPFEFKPERFLTTDKNVDVKGHHFELFPFGSGRRMCPGISFSLRIIHLILANFLHSFDIAVPSSEAIDMTESVGLTNIKATPLEVLVKPRLSPRLYEK. 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03843 523 PANTHER CYTOCHROME P450 82C3-RELATED 12 521 - -
Seca6g03843 523 Gene3D Cytochrome P450 20 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 Pfam Cytochrome P450 39 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 FunFam Cytochrome P450 82C4 24 513 - -
Seca6g03843 523 SUPERFAMILY Cytochrome P450 40 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Seca6g03843 523 CDD CYP82 68 515 - -
Seca6g03843 523 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03843 523 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03843 Seca-Chr6 105969488 105975449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03843 5 521 Cytochrome P450 AT4G31940 45.420 7.50e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03843 - - aip:107643961 627.861