Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03835 ATGGCAAAGGATATCTCAAACTCTTTCCATTTCTTTGTCATCCTTGTTTTAGCTGTCACAGGGAGCATAGTACAAATGACAGTGGTAGAAGGAACATGCTCACAAATTTTGGGTAGTTGCAATGCTGCAAATTGTGATCAGTATTGTAAAGCCCTGTACAGCAATGGAAAAGGGATTTGTAACTCCAATACCAACATATGCAACTGTTTTTATGATTGTGGGCCTCCACAACCTCTTAGGAAATGTGGCGTTGTACTTGGACTATGCAGTTCTCAATGTAATTCAAAGTGTGCTAGCGAATATAATCAGGGTTTAGGGTTTTGTAATTCCAGCTATGGTGTAAACGCGTGCGTTTGTAAATATAACTGTTAA 372 0.3898 MAKDISNSFHFFVILVLAVTGSIVQMTVVEGTCSQILGSCNAANCDQYCKALYSNGKGICNSNTNICNCFYDCGPPQPLRKCGVVLGLCSSQCNSKCASEYNQGLGFCNSSYGVNACVCKYNC. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03835 123 Pfam S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) 29 73 IPR010851 -
Seca6g03835 123 PANTHER DEFENSIN-LIKE PROTEIN 183 1 123 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03835 Seca-Chr6 105851391 105851881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03835 13 123 Plant Defensins Gene Families AT5G38330 32.773 1.21e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03835 - K20995 lja:Lj6g3v1329840.1 119.398