Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03807 ATGGCGGGGAAGGTGTCGAAGGCAGCTTACGATGCAAAGATGTGGAAGCTTCTGCGAGAGTACAGCCAAGTATTGGTGGTTTCATCGGATAATGTGGGGTCGAACCAGCTTCAGGGGATACGAAGGGCACTCCATGCTGACTCCGTGGTAGTGATGGGGAAGAACTCATTGATGAAGCGCTCTATCATCGAGGATGCTCAGAAAACTGGGAATAAAGCCTTCCTTAACCTAGTTCCCCTCCTTGTGGGGAACGTGGCATTGATTTTCACCAAAGGTGACTTGAGGGAGGTTAGCGAACGGATTGCCAAGTACAAGGTTAAGTAA 324 0.4969 MAGKVSKAAYDAKMWKLLREYSQVLVVSSDNVGSNQLQGIRRALHADSVVVMGKNSLMKRSIIEDAQKTGNKAFLNLVPLLVGNVALIFTKGDLREVSERIAKYKVK. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03807 107 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 5 107 - -
Seca6g03807 107 SUPERFAMILY Ribosomal protein L10-like 7 104 IPR043141 -
Seca6g03807 107 Gene3D - 3 107 IPR043141 -
Seca6g03807 107 Pfam Ribosomal protein L10 6 104 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03807 Seca-Chr6 105530399 105530871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03807 1 106 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 65.455 1.17e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03807 K02941 - mnt:21409050 152.14