Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03772 ATGGCATCACCGGTTACATCACCTACAAGTCCATTTCCAGTAGATCCTCCATTGGTCCATCCAGTCATACCAGCTGCATCTCCATCCAAGTTACCAGCACCTATTATCTCTCCGGCATTAACTCCTTCCAGAAGATTCAATTGGACAAAAGGTGGAGAACCAGCTTCTGCTCCTTCTTACAAAACACCAAAGCCACAATCAAAGCCACTACCGGCTATAGTACATTCCCCTGCTCAAGCTCCTGCTGTTCATAAAGAAAATCATCCTCCTGCATCTTCACCTTCAACCACAGTTTATAAGCATCACCATACAAGGAACACAATCACCAGTCCAGCTCCTGCATCATCATATTTAGTTTCTCCCCCCTCTTCAACACACCAAGATAAACCAATTCCTCCATCGTTACTGCCAACAAGTGGACGAAGACATCATGCACCACCACCAATAAACACAGGTTCTTCAGTTTCTCCATTCGCCTTCCCTATTCAATCACCAGTGAGCCAGGTCTCACCTGCTCCTTCTCCATCATTCAAAATATCCCCCCACCCAACCAAAATTCCATTTCATCCTCCTAAAGTATCTCCTTATCGGCCTTCTTCCAAGAGCCCTAAGAAGCCAATCTTCCCAGAAGTTCAAGCATTGCCACCCCCACCTCCCAATGAAGATTGTTTATCAACTGTTTGCCCAGAGCCCTATACAAATTCTCCACCTGGATCACCTTGCAGATGTGTCTGGCCCATGAAAGTTGGCCTTCGCCTTAGTGTTTCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATTGCCACTGGGGTTTTCATGAGACAAAGTCAAGTTCGCATTATGGGAGCCAATGCAGCAAGCCAGCAACCAGATAAAACTATTGCCCTCATTGATTTGGTACCACTTGGGGAAAATTTTGACAACACTACCGCCTTTTCAACTTCTGAGAGATTTTGGCACAAACAGGTTGTTATAAAAGCTTCTTACTTTGGTGATTATGACGTGTTATATGTGAACTATCCAGGTTTACCTCCATCTCCTCCTTTACCACCTTCAAGCATTAACATGATAGATGGTGGCCCATATTCAGTTGGTGGCAATAATGGTAGGACAATAAAGCCCCTTGGGGTTGACATACAGAAGAGGCAGCACAAGGGTGGACTTAGCAAGGGTGTAATAGCTATCATTGCTCTTTCAGTTTTTCTAGCAATTGTTTTATGCTCTGCTGCTGCTTTGGCCCTGTTCAAGTGCAGAGATCATGTGAGTCAACCAACATCAACCCCACGGGTTTTGCCTTCTCTTTCCAAAGCACAAGGTACTGCTGGGTCATTAGTTGGAGGTGTGCTTGCTTCGGCTTCATCATCATTTCGATCTAGCATTGCTGCTTATACAGGATCCGCTAAGACTTTCAGTATGAATGAGATAGAGAAAGCCACTGATAATTTTCATCCTTCCAGAATACTTGGAGAAGGTGGTTTTGGGCTTGTTTATAGTGGTAGCCTTGAAGATGGGACAAAAATAGCAGTCAAGGTTCTAAAAAGGGAGGATCATCATGGTGATCGTGAATTCCTATCTGAAGTTGAGATGCTTAGCCGCCTTCACCATAGAAATTTGGTGAAGTTGATTGGTATATGTCAAGAGGTCAGCTTCCGCTGCCTGGTTTATGAACTCATTCCAAATGGCAGCGTGGAATCCCATTTACATGGAGTTGACAGTGAAAACAGTCCACTAGATTGGAGTGCTCGGATAAAGATAGCACTTGGTGCTGCTCGTGGTCTGGCTTATCTGCATGAAGATTCAAGTCCACATGTCATACATAGGGACTTCAAGTCTAGCAATATCTTGCTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCTCGAACAGCAACTGATGGGGATAATAGACACATATCAACACGTGTCATGGGAACTTTCGGTTATGTGGCTCCGGAATACGCAATGACTGGGCATCTTCTTGTGAAGAGTGATGTTTATAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACAGGAAGAAAACCAGTAGACATGTCACAACCTCCTGGTCAAGAGAATCTTGTTGCGTGGGCACGTCCACTCCTCACAAGTAAAGAAGGATTGGAAGTAATAATTGATCCATCTCTAGGAACCGATGTGCCTTTTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTACAACCAGAGGTATCAGACCGTCCATTCATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTATGTAATGAATGTGATGAAGCAAAAGAAGCAGGTTCAAGAAGTTCTAGCCAGGAGGATTTATCTGTTGATTTGAATAATGTTTCTGGACATCTAACAGATAATTTCCAAGGCCAATTCTCAGTCACAAACTATGATTCTGGAGTTGATATTGAAAATGGTTTGTCAGCATCAGAGTTATTCAGTACATCAGCAAGACTTGGAAGGCAAGTATCTGGATCATTTAGATTACATTCTTATTCAGGTCCTCTGAGAACTGGAAGAAGCAGGCGGTTGTGGCAGATAATTCGAACGCTTTCCGGTGGCAGTGTCAGTGAACATGGAACTATGTTCAAGTTATGA 2625 0.4358 MASPVTSPTSPFPVDPPLVHPVIPAASPSKLPAPIISPALTPSRRFNWTKGGEPASAPSYKTPKPQSKPLPAIVHSPAQAPAVHKENHPPASSPSTTVYKHHHTRNTITSPAPASSYLVSPPSSTHQDKPIPPSLLPTSGRRHHAPPPINTGSSVSPFAFPIQSPVSQVSPAPSPSFKISPHPTKIPFHPPKVSPYRPSSKSPKKPIFPEVQALPPPPPNEDCLSTVCPEPYTNSPPGSPCRCVWPMKVGLRLSVSLYTFFPLVSELASEIATGVFMRQSQVRIMGANAASQQPDKTIALIDLVPLGENFDNTTAFSTSERFWHKQVVIKASYFGDYDVLYVNYPGLPPSPPLPPSSINMIDGGPYSVGGNNGRTIKPLGVDIQKRQHKGGLSKGVIAIIALSVFLAIVLCSAAALALFKCRDHVSQPTSTPRVLPSLSKAQGTAGSLVGGVLASASSSFRSSIAAYTGSAKTFSMNEIEKATDNFHPSRILGEGGFGLVYSGSLEDGTKIAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICQEVSFRCLVYELIPNGSVESHLHGVDSENSPLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTATDGDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSKEGLEVIIDPSLGTDVPFDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVCNECDEAKEAGSRSSSQEDLSVDLNNVSGHLTDNFQGQFSVTNYDSGVDIENGLSASELFSTSARLGRQVSGSFRLHSYSGPLRTGRSRRLWQIIRTLSGGSVSEHGTMFKL. 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03772 874 MobiDBLite consensus disorder prediction 149 175 - -
Seca6g03772 874 FunFam Receptor-like serine/threonine-protein kinase ALE2 562 780 - -
Seca6g03772 874 MobiDBLite consensus disorder prediction 89 132 - -
Seca6g03772 874 CDD STKc_IRAK 492 760 - -
Seca6g03772 874 Gene3D Phosphorylase Kinase; domain 1 458 561 - -
Seca6g03772 874 MobiDBLite consensus disorder prediction 1 204 - -
Seca6g03772 874 SUPERFAMILY Protein kinase-like (PK-like) 466 759 IPR011009 -
Seca6g03772 874 MobiDBLite consensus disorder prediction 176 197 - -
Seca6g03772 874 PANTHER OS01G0750732 PROTEIN 215 786 - -
Seca6g03772 874 FunFam receptor-like serine/threonine-protein kinase ALE2 459 561 - -
Seca6g03772 874 MobiDBLite consensus disorder prediction 9 23 - -
Seca6g03772 874 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Seca6g03772 874 Gene3D Transferase(Phosphotransferase) domain 1 562 785 - -
Seca6g03772 874 Pfam Protein tyrosine and serine/threonine kinase 489 759 IPR001245 GO:0004672|GO:0006468
Seca6g03772 874 ProSiteProfiles Protein kinase domain profile. 486 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g03772 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03772 Seca-Chr6 105059297 105065814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03772 4 870 Receptor kinase-like Gene Family AT5G56890 56.223 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca6g03772 PK_Tyr_Ser-Thr 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03772 - - psat:127136544 1384.78