Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03765 ATGCACCCCATGGAAGGTGTCTTTTCCCTCCCTGTAGCCGCCAGAACTGATTTTATCCACTCTTTAGCACAGTCTTTTGGCTGCTCTTACATTTGCCTCTGGGCATATGATTCCATATCATCCAAATATATATATACATTTATGCATAATATACTTACATTATTCCATTGTATTTTTCGTTTGTCCTTCTTGGATGGTTTCTACAATGTGAGAAACAACCAACCAAGCTCTTCTTTGGAGACTGTAGCACAAGGGCTTTTTAACCAATATAGGAGTTTAACATTTGATGTCAATGATGACCGTGTTCCTGGACTAGCTTTTAAGAATCGGTGTCCCTACCTTGAGCTACAACAATTGGAACTTCTGAGATTGGCATCAGCAGAAATACAAACACAATTCTATCTGGAAGCAAGGATTAAGGTTTGTTTGATGTCCAAGAAACTGAGAATCCTTTATTATTTCTTTCTGAGCTTTATGATGAATCAGAAATCTTATTAA 498 0.3735 MHPMEGVFSLPVAARTDFIHSLAQSFGCSYICLWAYDSISSKYIYTFMHNILTLFHCIFRLSFLDGFYNVRNNQPSSSLETVAQGLFNQYRSLTFDVNDDRVPGLAFKNRCPYLELQQLELLRLASAEIQTQFYLEARIKVCLMSKKLRILYYFFLSFMMNQKSY. 166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03765 Seca-Chr6 104959392 104960217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03765 14 143 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 36.842 2.48e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03765 - - gmx:100807098 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03765 6 104959392 104960217 Seca6g03765 6 104959392 104960217 ECH
Seca6g03765 6 104959392 104960217 Seca6g03764 6 104956726 104959351 PCT