Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03757 ATGGAACCTCGCGTTGGAAATAAGTTTCGGCTTGGCCGGAAAATCGGTAGTGGCTCGTTTGGGGAGATCTATTTAGGTACTAATATTCAGACTAATGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCCCAGTTGCTGTATGAGTCCAAGTTGTACAGAATACTCCAGGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTTTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGTAGTAGAAAGCTCTCACTAAAGACAGTTCTCATGCTTGCTGATCAAATGGTAGGCTGGATGATACAAAAATCATTCTCCTTACTTTGA 375 0.408 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMVGWMIQKSFSLL. 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03757 124 ProSiteProfiles Protein kinase domain profile. 9 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g03757 124 PANTHER CASEIN KINASE-RELATED 8 113 - -
Seca6g03757 124 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Seca6g03757 124 SUPERFAMILY Protein kinase-like (PK-like) 5 113 IPR011009 -
Seca6g03757 124 Gene3D Phosphorylase Kinase; domain 1 2 85 - -
Seca6g03757 124 FunFam Putative Casein kinase I 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03757 Seca-Chr6 104867110 104869856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03757 8 84 Miscellaneous Gene Families AT3G23000 32.927 3.89e-06 42.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Seca6g03757 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03757 K02218 - csv:101206138 228.794