Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03756 ATGGGCTTGGGAAGGCGAGCAAACCAAGTTTACTGTATTGATTTTGGTTTGGCGAAGAAATATAGAGATAGTACAACCCATCAACACATTCCTTACAGTTTGTCTTCAACTAGTATGCATGTTGTTGCTCTGAATGCCAGTCTATTTATTTGCTGTACTCTAGCTGGATTTTGTTCCTTCAAGCAGCTTCAAAACTCAGGATTGGAGGCTGCCAGTGGCAAGGACTACGGTTCTGATGGAAACATGAAACAACTGTTGCCAACATCCCCCCACCTGCTGCTGGCATCCTTTGATCAGCATCAGTACTGGGAAAATAAGAATTTGACTGGAACTGCGAGATATGCTAGCATGAATACCCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTATGTCTTGATGTACTTCCTGAGAGGAAGTCTTCCTTGGCAAGGACTTAAAGCAGGAAACAAGAAACAGAAGTATGAGAAGATCAGTGAAAAAAAAGTTTCTACCTCGATTGAGGCCTTGTGTCGAGGTTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGCTCATTAAGATTTGATGATAGGCCAGATTATGCTTATCTGAAAAGAATATTTCGCGACCTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTTGATTGGACCATCTTGAAGTATCAGCAATCACAGCTAGCCACTCCTCCATCACGTGCCATTGGTCCTAGTGCTGGAACTAGTTCTGGAATGCCTCCAGCTGTGACTAATGCTGATAGACAGACAGGAGGGGAAGAAGGACGGCCGCCACCTGGTCTGGTTTCAGTGGATTCCTCAAGGCGAAGAATGCCAGGACCCATGTTAAATTCTGTAAATATTTCTTCAAAGCTGAAAAATCCAGTCTCCAGTGATGCTGCTGTTAATAAGGATGCTATGTTATCAAGTGCCAATGTCTTGGGCCAGTCAAGTGGATCATCAAGGCGAGTAGCTGTTTCTAGTAGTCGTGATGCATATGTTGGTGCTGATTCGGATCCTCATACTCGAACTACTGAGGCTAGCCCTGCAGCAATACACAGAATTTCAAGCGGGCAAAGAAGTTCACCGATTGGGTCTTCAGATCCCAAGAGAGTGACATCATCTGGGAGAAACGCTTCTCATGTTAAGAATGTTGAGACTGCAGTCAAGGGCATTGAGGGCTTGCAATTAGAAAATGATGAGAGGGCCCATTATTAA 1239 0.4383 MGLGRRANQVYCIDFGLAKKYRDSTTHQHIPYSLSSTSMHVVALNASLFICCTLAGFCSFKQLQNSGLEAASGKDYGSDGNMKQLLPTSPHLLLASFDQHQYWENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPSRAIGPSAGTSSGMPPAVTNADRQTGGEEGRPPPGLVSVDSSRRRMPGPMLNSVNISSKLKNPVSSDAAVNKDAMLSSANVLGQSSGSSRRVAVSSSRDAYVGADSDPHTRTTEASPAAIHRISSGQRSSPIGSSDPKRVTSSGRNASHVKNVETAVKGIEGLQLENDERAHY. 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03756 412 SUPERFAMILY Protein kinase-like (PK-like) 94 225 IPR011009 -
Seca6g03756 412 PANTHER CASEIN KINASE-RELATED 2 326 - -
Seca6g03756 412 FunFam Casein kinase I isoform alpha 101 252 - -
Seca6g03756 412 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g03756 412 MobiDBLite consensus disorder prediction 238 258 - -
Seca6g03756 412 MobiDBLite consensus disorder prediction 320 334 - -
Seca6g03756 412 MobiDBLite consensus disorder prediction 348 389 - -
Seca6g03756 412 MobiDBLite consensus disorder prediction 320 394 - -
Seca6g03756 412 Gene3D Transferase(Phosphotransferase) domain 1 93 247 - -
Seca6g03756 412 Gene3D Transferase(Phosphotransferase) domain 1 1 46 - -
Seca6g03756 412 MobiDBLite consensus disorder prediction 238 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03756 Seca-Chr6 104860908 104866812 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03756 K02218 - gmx:100785851 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03756 6 104860908 104866812 Seca6g03756 6 104860908 104866812 ECH
Seca12g00681 12 6151115 6158021 Seca6g03756 6 104860908 104866812 PCT