Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03747 ATGGCCATGGGAGGCGCTCCTAAAGGACTATCCCCTAATGACGGATGCTACCTGAATCGTGTGGATAATCCCAATCCTGTATGGAACAGTGAAAATTCCCTACTATTGAACTTTCCTGCCCTTATCGTCCAGATTTTCATTGTTGTCCTTGTAACTCGTTTGATATTCTGCATCCTCAAACTCATCAATCAACCTCATTTCGTTGCTGAGCTTCTTGCGGCTTTCATCCTAAATATTCGTATATCTAGTCGAGACACGATTTTCCAGTATGCGCTCCCTGTGAAGGGAATCCTAAGTTTTGAAACCATTGCACAATTGGGTCTCATCTATTATGTATTCATCACTGGCTTGGAGATGAACTTAGACACTGTCCTACGTGCACGAAAGAAGGCAACAAGCATTGCCATTGCTGGCACCTTCATTCCTATGGTTTTGGGGGTTGGAATATATTATGTGGTTCTACATGTCTATGGTGAAGTGTCAGATTCAGATAACTACAACACACCTAAAGCTTATATATGTTGGGCTTTAGCTGTTGGTGTCACAAGTTTTCCCGTCCTTGCACACATTCTTGGGGACCTCAAGATCCTCTACACTGGGTTTGGTAGAGTGGCCTTAACAGCAGCCACTATTAATGACTTTTACAATTGGTCTCTGTTTGTGCTCTTGCTTCCATTTGCCGTTAATGGTCGAAATGGCATTTACTCAGTCATAGGCACCGTGATTTTCAGCCTTATCTGCTACTTTGTGTTACGCCCTCCCCTAAGGCGGCTATTAACACATAAAACTGATAAAAATGAGTGGGACAATTATCAATTGTCATATGTGATCATGGGTATCTTTGCTTGTGCCACTGTTACTGAAATGCTTGGTACACACTCTGTTGTTGGGGCTTTGGTGTTTGGATTGATCCTTCCTCGTGGAAGGTTTACAGAAATGTTGATAGAGCAATCAGATGATATTGGATCTGGGTATCTGGCACCGTTGTTCTTTGCTAGCATTGGTGTCAGAACCAACACACTTGATGTTATATCACATAAAGGTTTCACAATGTTTGCAGCAATCATGCTCTTGTTAGGCTCCACCAAGATTGTAAGCACTATAATAGCCACTCGCTTCTATGAAATGCCTGTAAGAGATAGTGTGGCTCTTGGAGTGCTTATGAACACCAAAGGCATCTTACCATTAATAGTGCTAAACGTTGCATGGAATAGGAAGATTTTGAGTCAGAAGTCCTTTACCATTATGGTGTACAGTATCTTTGTTATGACTGCAGTAGTGTCTCCTATCATCAACGCAATGTACAAGCCAAGAAGGACATATGAGCAAAATAAACTAAGGACTATTGAGAATTTGAAGGCTGATTCAGAAATCAGAGTTATGGTTTGTGTACACAACGCACGCCAAGCCAGTGGAATGATGAACATCCTTGAAGCCTGCAGTGGCACTAATGTTTCCCCTTTACGTGTTTTTGCTCTTCAGCTTATTGAGCTCAAAGGACGATCCACTGCCCTTCTAGTTGCTCACATGGAGCAACCCAATTCCCACCAGAGTGGACCTCAAGCACTTAGCAGATCAGAATCACACATGCAAGGCATTGCCTACAATTTTGAAGAATTTGCATCGAACCATGAACATATTTTTGTGGAGAATCTCGTTGCTATGTCATCCTATACAACTATTCATAAGGACATATACCATTTAGCATCAGAGAAACAAGCATCATTGGTTCTCCTTCCTTTTCAGAAACAGTCTAACTCAGAAGGTACTCTAGAGGAAACCAATACCTCATTCAAAGACATTAACCGGAATGTCATGCAAGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTGGTCCTGGGACATTGTCCAAGACCAATTTGCACATTCTTGTTCTCTTCATTGGTGGGCCTGATGACCGTGAAGCCTTATCAATTGCTTGGAGAATGTCAAGGCATCATGGGACTCAGCTCTCAATGGTGAGGATTATTTTGTGTGGAAAGGCTGCAGAAGTAAATAAATCAACCTATAATGAAGCTTATGGGCTATTATCTGCGGTACTAGACAGTGGAAGGCAAAAAGAGTTGGATGAAGAATATGTAGGTTCATTTAGACTCAAGGCAGTGAACAATGAGGATTCCATAACTTATTCAGAGATGGAAGTGCACACTGGTGATGCTATAAATGAAGTCCTTAATGAACTAGACAAAGGAGGTTATGATTTGTACATTTTAGGACAAGGAAAAGGAAGGAACTCTTCATTATTGGAAAATTTATTGGAATGGAGTGACTGCCCTGAACTTGGAGTTATTGGGGACATTTTGGCATCCAATAGTTTTGGTTCAAGCTCTTCAATACTTGTTGTGCAGCAATACGGTTTTGGGGGAATGGAATTTAAGGCTAATAATAACAACACTCAACCTTCCAACCAAGGGCGTTCAAGTGATGGTGACATTGAGACCCTTTTTCCAAAGAAAGAGTGA 2487 0.4154 MAMGGAPKGLSPNDGCYLNRVDNPNPVWNSENSLLLNFPALIVQIFIVVLVTRLIFCILKLINQPHFVAELLAAFILNIRISSRDTIFQYALPVKGILSFETIAQLGLIYYVFITGLEMNLDTVLRARKKATSIAIAGTFIPMVLGVGIYYVVLHVYGEVSDSDNYNTPKAYICWALAVGVTSFPVLAHILGDLKILYTGFGRVALTAATINDFYNWSLFVLLLPFAVNGRNGIYSVIGTVIFSLICYFVLRPPLRRLLTHKTDKNEWDNYQLSYVIMGIFACATVTEMLGTHSVVGALVFGLILPRGRFTEMLIEQSDDIGSGYLAPLFFASIGVRTNTLDVISHKGFTMFAAIMLLLGSTKIVSTIIATRFYEMPVRDSVALGVLMNTKGILPLIVLNVAWNRKILSQKSFTIMVYSIFVMTAVVSPIINAMYKPRRTYEQNKLRTIENLKADSEIRVMVCVHNARQASGMMNILEACSGTNVSPLRVFALQLIELKGRSTALLVAHMEQPNSHQSGPQALSRSESHMQGIAYNFEEFASNHEHIFVENLVAMSSYTTIHKDIYHLASEKQASLVLLPFQKQSNSEGTLEETNTSFKDINRNVMQDAPCSVGIFVDRGPGTLSKTNLHILVLFIGGPDDREALSIAWRMSRHHGTQLSMVRIILCGKAAEVNKSTYNEAYGLLSAVLDSGRQKELDEEYVGSFRLKAVNNEDSITYSEMEVHTGDAINEVLNELDKGGYDLYILGQGKGRNSSLLENLLEWSDCPELGVIGDILASNSFGSSSSILVVQQYGFGGMEFKANNNNTQPSNQGRSSDGDIETLFPKKE. 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03747 828 PANTHER CATION/H + ANTIPORTER 31 793 - -
Seca6g03747 828 MobiDBLite consensus disorder prediction 802 818 - -
Seca6g03747 828 Gene3D - 39 444 IPR038770 -
Seca6g03747 828 Gene3D - 488 771 - -
Seca6g03747 828 MobiDBLite consensus disorder prediction 802 828 - -
Seca6g03747 828 Pfam Sodium/hydrogen exchanger family 46 432 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03747 Seca-Chr6 104791285 104794876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03747 16 793 Antiporter Super Family AT2G13620 36.375 1.90e-180 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03747 - - mtr:11442852 1040.8