Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03746 ATGAACGATTACATGGCCCAATTTCAAGCCCATTACGCCCAATTGGACGAGATGGATCATAACAGAACCAAGCGGGCTCGTCGCTCTGCTGTTTCTGTTGCCACTGCTGCTGCCGGTTCGGGTTCAGATGAACCCGGTTCGTCGGTTCAAAATCAAAATACTACTCATAATCAGCAGCACCGGCGGTTATGGGTTAAGGACCGGTCCAAGGACTGGTGGGAGCGGTGCAGCCGGCAGGACTTCCCGGAGGAAGAGTTCCGGCGGTGGTTCCGGATGAGCAAGGCCACGTTCAACATGATCTGCGACGAGCTCGATTCGGTTGTGATGAAAAAAAACACGATGCTTCGCGACGCAATTCCGGTTCGCCAGCGTGTCGCGAAGTTTCTCCATTGGCCTAATGACGAAAACATGAAGAGGATCAAGGAAGAGTTCGAGGGCATTTCAGGAGTTCCAAATGTCGGTGGTTCAATGTACACAACCCATGTTCCTATCATTGCACCTAAGAAAGGGAGGTGGGCTTGTTTGCAGAAGAGAACAGAGGTAAAGCTTCAGGATTTGCCTGTGGTACTTGGTGCTTGTTGTGTTTTGCATAACATTTGTGAGATGAGGAATGAAGAGATGGATCCAGAATGGAAGTTTGAACTTTTTGATGATGAGATGGTGGCTGAGAATAGCATACGCTCTGCCACTTCAATGCAGGCTAGGGATCAAATAGCTCACTATTTGTTACAGAAAAGAGAGGAACGAGAGAGAGAGAGAGAGAGAGGGGTTTTGGGCATGGAGAATCACAAGGAGGAGAGTGAGGAGGTGATGGTAGGGGAGGAGAATGATGAGGTGGGACCCATGGCTGGTAAGGAGGAGGAAGATGAAGGAGCAGCTGGTTCGAGCTTAACCATGGAGAGGGTAGCTGTAGCCAAGAAATTCATTGAGAACCATTACAGGGCTCAGATGAAACACATCCAAGAACGCAAACAGAGGCGTTCAGTGCTACAAAAAGCATTAGAATCTTCCCATGTACCGAAAGAGGAACAGATTGATCTGCTGAAGGATTTAGAGCGCAAGGAGACTGAGTATATGCGGCTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGGGAGGTAAGGCTCTGTCGGGAGAAGAAATCAGGTAATATATATGCCATGAAAAAGTTGAAGAAAGCTGAAAGGAACGTGCTGGCTGAAGTTGCCAGTGACTGCATTGTGAAACTGTATTACTCTTTTCAGGATGCTGAACACTTGTATCTTATAATGGAATATTTACCTGGTGGTGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACTGAAACTGTGTCTAGATTTTACATTGCCCAAAGCGTTTTGGCCATAGAGTCAATTCATAAACATAACTACATTCATCGGGATATAAAACCTGATAACCTTCTATTGGACAAAAATGGTCATATGAAGCTGTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCAAATCTATCATCTATAAATGAAAATGAAGTATTGGATGATGAGAACTTGAATGATACCGTGGATGGTGATGGAGCTTTCCCAAATAACAGGAATGGTAGGCGTTGGAAAAGTCCCCTCGAACAACTTCAACATTGGCAAATGAATAGGAGGAAGCTGGCATTTTCCACTGTTGGAACTCCAGACTATATTGCTCCGGAAGTGTTACTGAAAAAGGGTTATGGCGTGGAGTGCGACTGGTGGTCTCTTGGTGCTATAATGTATGAGATGCTTGTTGGTTACCCCCCATTTTACTCTGATGATCCTGTAACAACATGCAGAAAGATTGTGCACTGGAAAAATCACTTAAAATTTCCAGAGGAAGCAAGATTGACGCCTGAAGCAAAGGATCTGATATGTAGGTTGCTTTGTAGTGTTCCACATAGGCTTGGTACCAGAGGAGCAGATGAAATTAAAGCTCATCCTTGGTTCAGAGATGTCATATGGGACAGGCTCTATGAAATGGACGCAGCATTTAAACCACAAGTCAATGGGGAGCTTGACACACAGAATTTTATGAAATTTGATGAGGTTGAACAACCAAAACCAACTAGATCTGGCTCCGGACCCATGAGAAAGATGCTCTTAACTCCTCAAGATCTCAGTTTTGTTGGTTATACATATAAGAATTTTGCTGCTGTCAAGGGGAATCGTCATTCTACTGATAAGGGGAGGAGCTTGTCACCACAGCGGCAATCAGTTGATTCCTCACACAGTAATGGAACCTAA 2292 0.4463 MNDYMAQFQAHYAQLDEMDHNRTKRARRSAVSVATAAAGSGSDEPGSSVQNQNTTHNQQHRRLWVKDRSKDWWERCSRQDFPEEEFRRWFRMSKATFNMICDELDSVVMKKNTMLRDAIPVRQRVAKFLHWPNDENMKRIKEEFEGISGVPNVGGSMYTTHVPIIAPKKGRWACLQKRTEVKLQDLPVVLGACCVLHNICEMRNEEMDPEWKFELFDDEMVAENSIRSATSMQARDQIAHYLLQKREERERERERGVLGMENHKEESEEVMVGEENDEVGPMAGKEEEDEGAAGSSLTMERVAVAKKFIENHYRAQMKHIQERKQRRSVLQKALESSHVPKEEQIDLLKDLERKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKAERNVLAEVASDCIVKLYYSFQDAEHLYLIMEYLPGGDIMTLLMREETLTETVSRFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDENLNDTVDGDGAFPNNRNGRRWKSPLEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKFPEEARLTPEAKDLICRLLCSVPHRLGTRGADEIKAHPWFRDVIWDRLYEMDAAFKPQVNGELDTQNFMKFDEVEQPKPTRSGSGPMRKMLLTPQDLSFVGYTYKNFAAVKGNRHSTDKGRSLSPQRQSVDSSHSNGT. 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03746 763 MobiDBLite consensus disorder prediction 41 59 - -
Seca6g03746 763 SMART pkinase_C_6 666 731 IPR000961 GO:0004674|GO:0005524|GO:0006468
Seca6g03746 763 Gene3D Transferase(Phosphotransferase) domain 1 444 682 - -
Seca6g03746 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Seca6g03746 763 MobiDBLite consensus disorder prediction 737 763 - -
Seca6g03746 763 SMART serkin_6 371 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g03746 763 FunFam Non-specific serine/threonine protein kinase 564 683 - -
Seca6g03746 763 FunFam Non-specific serine/threonine protein kinase 442 509 - -
Seca6g03746 763 MobiDBLite consensus disorder prediction 747 763 - -
Seca6g03746 763 ProSiteProfiles AGC-kinase C-terminal domain profile. 666 739 IPR000961 GO:0004674|GO:0005524|GO:0006468
Seca6g03746 763 MobiDBLite consensus disorder prediction 20 61 - -
Seca6g03746 763 MobiDBLite consensus disorder prediction 261 296 - -
Seca6g03746 763 Gene3D Phosphorylase Kinase; domain 1 361 443 - -
Seca6g03746 763 PANTHER SERINE/THREONINE-PROTEIN KINASE 231 709 - -
Seca6g03746 763 SUPERFAMILY Protein kinase-like (PK-like) 354 715 IPR011009 -
Seca6g03746 763 CDD MobB_NDR_LATS-like 305 366 - -
Seca6g03746 763 ProSiteProfiles Protein kinase domain profile. 371 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g03746 763 CDD STKc_NDR_like 369 730 - -
Seca6g03746 763 ProSitePatterns Protein kinases ATP-binding region signature. 377 400 IPR017441 GO:0005524
Seca6g03746 763 Pfam Protein kinase domain 373 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca6g03746 763 Pfam Protein kinase domain 557 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03746 Seca-Chr6 104770663 104786870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03746 260 750 AGC Kinase Gene Family AT2G19400 72.530 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Seca6g03746 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03746 K08790 - gmx:100811359 845.114