Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03729 ATGGAAGAAGAAAAAGGCGTGACAGACAAGAAAGGGACAAAGAACGAGGTTGTTCTGCAAATTTCAGGCAACGAAGAAGCTTTCTATGCAAAGAAGGAACGCAGAGATTTTAGAGGTTCCCCACTTGCTGAAAGCAGTTCCTATTCTCCTCAGTTCAATTCCCAGATGGGTTCATCTTCATCGCCAAAAGGGTTCAGAGATTCAAACGGTGAACTCATAGAGCTTGAGAATCTCAGAAACAGGGGTCAACTTTCCACAGAGTTGTTAACAACTACAAGGACGTTGTTGGGTCGGTCGGAGTTCTCGAAGCCAAAGTCCAGAATGGTGGAACCACCATATCCTAAAGATGCGAACTTTGTTGAAGAGAAGACTCGAATGAAGAGTTCCAATTCATCTGCAAGGAGTTCTCCTAACAAGAAGTTTGCAGCTACTCCTCCAAAGGATGTTTCTGATGCAACTCTTAGTACCCCTCGAACCCCGTTGATTGGGACTCCAGGGGAAGAAGAAGATGAAGATGAAGAAGTGTACAAGAGTGCAGATATTGAAGTGAGCAAGAGATCTGGTAAGAAGTGGAAACTAAGGAGTTTGATTGAGTGGTTTGCTTTTGTTTGCATTGTGGGGTTTTTTATTGCAAGCTTAACGGTTCATAAGTTGCAACATAGGGGAATTTGGGGTTTGGAACTGTGGAAGTGGTGTGTGCTGGTATTGGTTATCCTCTGTGGTAGACTGTTCACTGAGTGGTTCATCAATGTTCTAGTTTTCATGATTGAAAGGAACTTCTTGTTTAAGAAGAAGGTTTTGTATTTTGTTTATGGTGTGAAGAATAGTGTCCAGGCCTTTTTATGGTTAAGTTTGGTTCTTTTGGCATGGGGTCTACTTTTCAACCATGGAGTCAAGAGAACTAGAAAAGTTACTAGGATTCTCAATTATATTACTAGGGCCCTTGCCTCTTGTCTTATTGGAGCAGCTATATGGTTAGCAAAAACATTTTTGATAAAGCTATTATCTTCATATTTCCAATCTACTAGATTTTTTGACAGGGTTCAAGAATCAATCTTTCATCAGTACATTCTTAGGACTCTTTCTGGCCCTCCTTTGATGGATATGGCTGCAACAGTAGGCAAGACTTCAAGTAGTGGTAGACTCAGTTTCAAGACCTTGATTAGAGATAAAGAGAATGAAGGGAAGAAAGAACAAGTCATTGATGTTGACAAGCTCAAGAAAATGAAACAAGAGAAAGTATCTGCTTGGACCATGAGAGGGTTGATTAATGTGATAAGGAGTTCTGGATTGTCTACCATCTCCTATACACCAGAAAATGTTGATGAAGATGAGAGTGACCAGAAAGATAATGAAATTACTAGTGAGTGGGAAGCAAAGGCAGCTGCTTATAGAATTTTCAGGAATGTAGCCAAGCCAGGAAACAAGTACATTGAGAAGGAAGACCTCCTGCGCTTCATGAAAAATGAAGAAGTGGAAAATGTGCTTCCACTGTTTGAAGGGGCAGTTGAGACTGGAAAAATTAAGAGGAAGTCTCTGAAGAACTGGCTGGTAAAGCCTCTTGATATAGGATACATTACATTTTATTTGTTTAGAAATTGTAGAACATGTTGA 1614 0.4033 MEEEKGVTDKKGTKNEVVLQISGNEEAFYAKKERRDFRGSPLAESSSYSPQFNSQMGSSSSPKGFRDSNGELIELENLRNRGQLSTELLTTTRTLLGRSEFSKPKSRMVEPPYPKDANFVEEKTRMKSSNSSARSSPNKKFAATPPKDVSDATLSTPRTPLIGTPGEEEDEDEEVYKSADIEVSKRSGKKWKLRSLIEWFAFVCIVGFFIASLTVHKLQHRGIWGLELWKWCVLVLVILCGRLFTEWFINVLVFMIERNFLFKKKVLYFVYGVKNSVQAFLWLSLVLLAWGLLFNHGVKRTRKVTRILNYITRALASCLIGAAIWLAKTFLIKLLSSYFQSTRFFDRVQESIFHQYILRTLSGPPLMDMAATVGKTSSSGRLSFKTLIRDKENEGKKEQVIDVDKLKKMKQEKVSAWTMRGLINVIRSSGLSTISYTPENVDEDESDQKDNEITSEWEAKAAAYRIFRNVAKPGNKYIEKEDLLRFMKNEEVENVLPLFEGAVETGKIKRKSLKNWLVKPLDIGYITFYLFRNCRTC. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03729 537 MobiDBLite consensus disorder prediction 32 77 - -
Seca6g03729 537 MobiDBLite consensus disorder prediction 42 66 - -
Seca6g03729 537 MobiDBLite consensus disorder prediction 124 139 - -
Seca6g03729 537 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 7 519 IPR016688 -
Seca6g03729 537 MobiDBLite consensus disorder prediction 99 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03729 Seca-Chr6 104594568 104596385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03729 38 519 Mechanosensitive Ion Channel Family AT5G12080 47.951 7.91e-142 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03729 K22048 - gmx:100777332 775.393