Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03706 ATGCCTCCCATGTCAACGATTCCAATTCACAGACCTGAATTCCATGCCTTATACTTCAATGGGTCTCCCAGACCATACAAATGCGCACGAATTGCTGCATCATGGACCATGAATAGGACCATGGATTCCAAATTTTCCCCAACAATGAATAATAATAATGATAATTTGAAGAAGCAAGAACTCTCAGTTCAGCTTTCAACGCCACCCATTCCCAAAGTGGAAACTTTAAGCTCCAACAATCTCCGATTTGACCGATTGCAGCCATCAGACCAAGAATTGGTTCGAGAAAATAGGTTTGAGTTTGGGCAATTTGTTGCACGAGAAGCCGTGCTTGATGAAGAGTATTGGACAGCAGCATGGCTAAGGGCAGAAAGTCATTGGGAGAATCGAACATATGAAAGATATATTGATAACTACAAAAGGAAATTTGCTGAGCAGGAATTTAATGCAGTAAAAAAGCGGTGCAAGGTGCAAATTGGGGATAGCTGCACATGTGTTATCACGGTGAGGAAGGAGCAGAAGAATGTAAAGCACTCGATATTAAAAAGTGTTGTAGGAACCCTTGATTTGAATATCCGATATTTGCTGCAAGGGGAGACTTTTCCTGGGGAACGGGTAAAGGCTCCTCTTTTTTGCAGCATCAACAGAACACCACCAAGCAGATATGCCTATATTGCTAACCTATGTGTTGCCAAATCAGCTCGCCGACAGGGAATTGCAAGCAACATGATGTATTTTGCTGTTGAAGCTGCAAAATCTAATGGTGTGACACAGGTATATGTGCATGTGGACAGAAATAATAGCCCTGCACAGTTATTGTACCAAAAGATGGGCTTCGAGATGGTTGAAACGGCAAACTCCCGGTCGTTACTAGAGGAGACATACTTGCTACGTTTGCTGACGTGA 906 0.4283 MPPMSTIPIHRPEFHALYFNGSPRPYKCARIAASWTMNRTMDSKFSPTMNNNNDNLKKQELSVQLSTPPIPKVETLSSNNLRFDRLQPSDQELVRENRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRTYERYIDNYKRKFAEQEFNAVKKRCKVQIGDSCTCVITVRKEQKNVKHSILKSVVGTLDLNIRYLLQGETFPGERVKAPLFCSINRTPPSRYAYIANLCVAKSARRQGIASNMMYFAVEAAKSNGVTQVYVHVDRNNSPAQLLYQKMGFEMVETANSRSLLEETYLLRLLT. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03706 301 Gene3D - 87 289 - -
Seca6g03706 301 CDD NAT_SF 211 262 - -
Seca6g03706 301 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 299 - -
Seca6g03706 301 Pfam Acetyltransferase (GNAT) family 154 279 IPR000182 GO:0016747
Seca6g03706 301 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 211 301 IPR000182 GO:0016747
Seca6g03706 301 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 137 285 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03706 Seca-Chr6 104338593 104341528 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca6g03706 Acetyltransf_1 8.2e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03706 - - gmx:100795426 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03706 6 104338593 104341528 Seca6g03706 6 104338593 104341528 ECH