Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03683 ATGGCTTTATCAATTTCCTCCACTGCATTGTCAAGTTTTCCAAACATAGAAATACGCCAAAAGGTTTTCCCTGAAAGAACAGCCACATACACATGCTTGAGCAGAAGAACCTTTACAAATGCAACAAAAGGAGTCTCAGATGTCTGTGAGCCACTCCCTCCAGATAGGCCTTTGTGGTTCCCTGGTAGTTCACCTCCTCCCTGGCTTGATGGCAGTCTTCCTGGTGATTTCGGATTTGACCCACTTGGATTAGGGTCTGATCCAGAGTTGCTTAAATGGTTTGCTCAGGCTGAACTAATGCATGGTAGATGGGCAATGCTTGCTGTGTCTGGAATTCTGATTCCAGAATTGCTTGAAAGGATGGGTTATGTTGAGAACTTCTCTTGGTATGAAGCTGGTACTCGAGAGTACTTTGCAGATCCCACAACCTTGTTCATTGTACAATTGGCCTTGATGGGTTGGGTGGAGGGTAGAAGATGGGCTGATTTGATTAACCCAGGGAGTGTTGATATTGAGCCCAAGTTTCCAAATAGGCCCAACCCAAAGCCAGATGTTGGTTACCCAGGTGGGTTGTGGTTTGACCCCTTGATGTGGGGAAGAGGGTCACCAGAGCCTGTCATGGTGTTAAGGACTAAGGAGATCAAGAATGGTAGACTTGCAATGTTGGCTTTTGTTGGCTTCTGGTTCCAAGCTATTTATACTGGACAAGACCCCATTGAAAATTTGATGGCACACCTTGCAGATCCTGGTCACTGCAACATTTTCTCGGCTTTCACTTCCCAGTAG 786 0.4606 MALSISSTALSSFPNIEIRQKVFPERTATYTCLSRRTFTNATKGVSDVCEPLPPDRPLWFPGSSPPPWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHGRWAMLAVSGILIPELLERMGYVENFSWYEAGTREYFADPTTLFIVQLALMGWVEGRRWADLINPGSVDIEPKFPNRPNPKPDVGYPGGLWFDPLMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGQDPIENLMAHLADPGHCNIFSAFTSQ. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03683 261 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Seca6g03683 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 259 IPR001344 GO:0009765|GO:0016020
Seca6g03683 261 FunFam Chlorophyll a-b binding protein, chloroplastic 66 251 - -
Seca6g03683 261 Gene3D Chlorophyll a/b binding protein domain 66 251 - -
Seca6g03683 261 SUPERFAMILY Chlorophyll a-b binding protein 55 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03683 Seca-Chr6 104111907 104114637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03683 54 261 Chloroplast and Mitochondria Gene Families AT3G61470 68.269 2.65e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03683 K08908 - gmx:100800374 486.878