Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g03671 | ATGTCATTCTTTATAAGTCACACCATTCGACTGTTAATTTCACAGGTTGTGGTATTCTTTTCAACATGTGATGCAGTAGATTTTCACTTTTCACTATTAAGTGAATTCCAATTTTCATCCTATCCACAAACAGAAGGAGGGATCAAACAGATGTTTCTTGGGTGCAAAACTTTTCGATTACATGGTAATATGGAACAGGAAGATCGGCTAAAAGCTTTTCAGGCCTTTAAAACAGAGAAATCTGCTCTGCTTTTGTCCACTGATGTTTCTGCTCGAGGTCTGGATTTCCCGAAGGTTAGATGCATCATACAGTATGATTCTCCTGGAGAAGCTACTGAATATGTGCATAGAGTTGGTAGAACTGCTCGGCTGGGTGAAAAAGGAGAATCATTGTTATTTCTGCAACCAGTTGAAATAGACTATTTACAGGACTTGGAGAAACATGGTGTCTCATTAACAGAGTATCCTCTCCTCAAAGTCTTGGATAATTTTCCTCTGTATGGACAGCAGAAACACTTGAAGAAATCTGTTTTCATAGATTCACATCCCTGGGTCCTCTCTCTCCAGAAGGCACTTGAATCCTTCATCATTTCCAAGCCTAAGATGGATGAACTTGCCAGGAGGGCATTTTGCTCTTGGGTCCGTGCATACACAGCGCATCGCGGTGAGCTGAAAAGAATATTTATGATCAAGAAACTTCACTTGGGGCATGTAGCAAAAAGCTTTGCATTGAAACAACAACCCTCCTTAGTTGGAAAGTCATTCCAGAAGCAAACTCAGAAGAGGAAGAGATATGAGAAGAAAAATGGGCTGTCAAAAAGGAGAAAAGTTGCAAGGGTGACATAA | 846 | 0.4043 | MSFFISHTIRLLISQVVVFFSTCDAVDFHFSLLSEFQFSSYPQTEGGIKQMFLGCKTFRLHGNMEQEDRLKAFQAFKTEKSALLLSTDVSARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGEKGESLLFLQPVEIDYLQDLEKHGVSLTEYPLLKVLDNFPLYGQQKHLKKSVFIDSHPWVLSLQKALESFIISKPKMDELARRAFCSWVRAYTAHRGELKRIFMIKKLHLGHVAKSFALKQQPSLVGKSFQKQTQKRKRYEKKNGLSKRRKVARVT. | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g03671 | 281 | MobiDBLite | consensus disorder prediction | 257 | 281 | - | - | |
Seca6g03671 | 281 | MobiDBLite | consensus disorder prediction | 253 | 281 | - | - | |
Seca6g03671 | 281 | Pfam | Domain of unknown function (DUF4217) | 189 | 249 | IPR025313 | - | |
Seca6g03671 | 281 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 12 | 164 | IPR027417 | - | |
Seca6g03671 | 281 | SMART | helicmild6 | 42 | 125 | IPR001650 | - | |
Seca6g03671 | 281 | SMART | DUF4217_3 | 187 | 252 | IPR025313 | - | |
Seca6g03671 | 281 | PANTHER | RNA HELICASE | 11 | 253 | - | - | |
Seca6g03671 | 281 | Pfam | Helicase conserved C-terminal domain | 13 | 125 | IPR001650 | - | |
Seca6g03671 | 281 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 8 | 172 | IPR001650 | - | |
Seca6g03671 | 281 | CDD | SF2_C_DEAD | 10 | 134 | - | - | |
Seca6g03671 | 281 | Gene3D | - | 4 | 278 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g03671 | Seca-Chr6 | 103941698 | 103945565 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g03671 | 11 | 157 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 30.405 | 1.42e-18 | 83.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g03671 | K14806 | - | gmx:100805157 | 470.314 |