Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03665 ATGCAGGCCCAACTCACACTTCTGCTCACTACTCTCTTCCTCTCCCTCTTGTTCACGTTCTCGTGCGCCGCCGAGGCCCAAGATCTGGTCCGTTCCTCATGCGTCCACGCCAGGTACCCAAGGTTGTGTCTTCGAACCTTGTCCAACTACGCTGGGCCTGCCAACAGCACGTTGGACGTGGCCCGGGCCGCGCTGAGGGTGAGCCTGGCGCATGCCCGTAGGGCCTCCGAGTACCTGCGGGCTTACAAAGGAGGCGCCAGTAGCAGCAGCTTGAGCAAGCGGCAACGGGCCGCACTGACTGACTGCGTAGAGCAGGTTTCGGACTCAGTGGAGGAGCTGCGGAAGAGCCTGGAGGAGCTGCAGCACCTTCGCCCAGAGACATTCCGGTGGCAGATGAGTAACGCCATGACGTGGGTCAGCGCCGCCCTCACCGACGGCGATACCTGCCTCGACGGCAATGTCAGGCCCGACGTGAAGCGCAGAGTCACCGACTTGGCAAGGGTCACCAGCAATGCTCTTTACATGATCAATCGTCTGGGCCAAGGTGGGACCGGGAAGCCCAAGCCTCGTTCTGGCCCGGGCTCAAATTCCAATAACTGA 600 0.615 MQAQLTLLLTTLFLSLLFTFSCAAEAQDLVRSSCVHARYPRLCLRTLSNYAGPANSTLDVARAALRVSLAHARRASEYLRAYKGGASSSSLSKRQRAALTDCVEQVSDSVEELRKSLEELQHLRPETFRWQMSNAMTWVSAALTDGDTCLDGNVRPDVKRRVTDLARVTSNALYMINRLGQGGTGKPKPRSGPGSNSNN. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03665 199 NCBIfam pectinesterase inhibitor domain 2 179 IPR006501 GO:0004857
Seca6g03665 199 Coils Coil 103 123 - -
Seca6g03665 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 180 IPR035513 -
Seca6g03665 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 174 - -
Seca6g03665 199 CDD PMEI-like_3 32 179 - -
Seca6g03665 199 SMART PMEI_2 25 175 IPR006501 GO:0004857
Seca6g03665 199 MobiDBLite consensus disorder prediction 178 199 - -
Seca6g03665 199 Pfam Plant invertase/pectin methylesterase inhibitor 28 174 IPR006501 GO:0004857
Seca6g03665 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 179 IPR035513 -
Seca6g03665 199 FunFam Pectinesterase inhibitor 3 25 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03665 Seca-Chr6 103896514 103897113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03665 29 179 Carbohydrate Esterase AT3G14310 30.247 2.67e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03665 - - gmx:100816686 266.929