Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03659 ATGGAATACGGTGGAGGCTCCAAACTAACAGGAATTAGGCAGATTGTGAGACTAAAGGAAATACTTCAAAAGTGGCAAAGTGTCACCTTAAGCTCAAAAAATCCCCTTCCCAAATCTGATGCAACTCATGAGAGCAGATCACCAATAATTAACAAAAGGATAACAAATGTTATGAGTTGTGACTCCGATGAGGATAGCTGCCAAAGTCCTGAACCACCACCTGATGTTCCAAAAGGTTACTTGGCAGTGTATGTTGGACCAGAGCTTCGGAGGTTCATCATCCCCACCAGCTACCTTAGCCACTCTCTATTCAAAGTTTTGCTGGAAAAGGCTGCTGAGGAATTTGGGTTTGACCAGAGTGGCGGGCTCACTATCCCATGTGAGATTGAGACCTTTAAATACCTCCTCAAATGCATGGAGAGCCAGCAGAATGAACACCATGATGAAAGCTCGTGTGATGAAAACACAGCAACTTTGGAAGATTAA 486 0.4383 MEYGGGSKLTGIRQIVRLKEILQKWQSVTLSSKNPLPKSDATHESRSPIINKRITNVMSCDSDEDSCQSPEPPPDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLKCMESQQNEHHDESSCDENTATLED. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03659 161 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 56 135 IPR003676 GO:0009733
Seca6g03659 161 Pfam Auxin responsive protein 59 138 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03659 Seca-Chr6 103804785 103807580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03659 1 151 Calmodulin-binding Proteins AT5G20810 69.677 4.81e-73 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03659 K14488 - cpap:110808074 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03659 6 103804785 103807580 Seca6g03659 6 103804785 103807580 ECH
Seca12g00572 12 5175548 5177470 Seca6g03659 6 103804785 103807580 PCT