Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03653 ATGGCATCGTCAGAGAATGAGCCTTCTTCTCACTCTCCTCCTACTCCTCCTGCACATGCCTGTATGAACAAGTTTAGGCTCTATGAGACTCTATCGAACTTTTACATGATAGGAAGGGACTATAGCAGGACATATTGGAGAGTGCTAAAGATTGATCGTCTAGATCCCTCCGAGCTAAATTTGCGTGAAGATTCCACCACGTATACAGAAAGTGAATGTTCTGACCTGTTGAGGCGTATACATGAGGGGAACAAGTCCACGGGTGGACTGAAATTTGTCACAACTTGTTATGGAATTGTTGGGTTCATAAAATTTTTGGGGCCTTACTACATGCTGCTTATCACAAAAAGAAGGCAAATCGGGGCAATCTGTGGTCATACAGTGTATGCTGTCTCAAAGAGTGAGATGATTCCACTACGAAATTCTCCAGTTCATTCTAACATCACCGATTCTAAAAATGAAAACAGATACAAGAAACTCCTATGCATGGTCGACCTTACGAAGGACTTCTTTTTCAGCTACTCATACCAAATTATGCGTAGTCTTCAAAGGAACTTATGTGATAATGAAACAGGCCATGTCCTTTATGAGACCATGTTTGTCTGGAATGAGTTTTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTCTCTGGACCGTTGCACTAGTGTATGGCTTTTTTAAACAGGACATACTTACAATATCTGGGCGAGAGTTCATACTTACGCTCATTGCAAGACGGTCACGTCATTATGCTGGCACTAGGTATTTGAGACGAGGTGTTAATGAGAAGGGTAGAGTAGCTAATGATGTTGAGACAGAACAAATTGTGTTTGAGGATGTTCCTGAAGGCCTCCCGGTCCAAATAAGCTCTGTTGTCCAGAACCGGGGCTCAATCCCTCTTTTCTGGTCACAGGAAACTTCGCGTCTGAATCTTAAGCCAGATATTATATTGTCAATGAAGGATCCAAATTATCAAGCCACCAGACTTCACTTTGAAAATCTTGTCAAAAGATATGGGAATCCCATAATAATTTTGAATTTGATAAAGACACATGAGAGGAAACCTCGCGAGTCTATACTTCGTACAGAGTTTGGTAATGCTATTGATTTCATTAACAAGGATTTATCAGAGGAGAACAGGCTTAGGTTCCTTCACTGGGATCTGCACAAACATTTTCGGAGCAAATCTGCAAATGTTTTGCTACTTCTGGGAAAAGTGGCTGCATATGCCTTAACATTAACAGGTTTTTTCTACTGCCAAGTGACATCAACTTTTAGACCAGAAGACTGTATAAAATGTCCATCTAGAAGTTTCGCATACAGCAATGTTGACAATGGAAGCTTTCAACCTACAAGACGTGATGGTGTTGACAAAGAGAATGCTGATAATTTAGAGAGGAAACCTAGTGGAGGAAGCAGCATTGTGAATGGAAACCATTCTGTCAAGCCACCAATATTCCAGAGGGGGGTGCTCAGGACCAATTGCATAGACTGCTTAGATCGCACGAATGTTGCACAATATGCATATGGGTTGGCTGCGCTTGGCCACCAGCTTCATGCTCTGGGAATTATTGACCACCCAAAAATTGACCTTGACAATCCTCTAAGCGATGATTTGATGGGATTTTATGAGCGGATGGGTGACACACTTGCACACCAGTATGGTGGTTCTGCCGCACACAACAAGATATTCTCTGAGAGGAGGGGACAATGGAGAGCTGCAACCCAGTCTCAGGAGTTTTTTAGGACTCTTCAACGCTATTACAGCAACGCATACATGGATGCTGAGAAGCAAAATGCTATTAATGTATTCCTGGGGCATTTTCAGCCACAACAGGGTAAGCCTGCTCTATGGGAGTTGGGTTCAGATCAACATTATGATGTAGGGAGACACGGGGATGACGATGCAAGCTTGTGTGGTAACTCTGAAATGTGGTTTTATAGGTCAATTGTCAAAAGATGTTTCTCAGATGGAAACATTCTTCATGAAAGTTCCACACCCATGTCAGCCCAAAATCCCAAGCTGGAAAAATTCTCAAAGCTGGGATTGCTGGACCAATCTGAAGAAGAAAGCAAGGTTTTTTGTGAGTCATCGCCTGAAATATCAACTTCTGAGAGTGGCATGTCATTTTCAAGATACACCCCCTCAATGCCCCGCAGACAGCTTTTTGGAGACATGCAAAGAGAGAACTTCCTTGAAAGTGATCATATTTTCTATTCTGAGCATGGGGAGTCATCCAGCTACTCCAACTTTGTTGACTTAGACTGGCTATCTTCTTCAGGAAATTCATGCGAAGAAGAGCCATTCGAGAGGTCATCAATTACAAACTCTCCGATTGCTGGTCTTTCTTTAGAAAATGTAAATGGAGTTATTATTGGAGGAGATACAACTTCCTCTACTAGTGATTTGGAGTCCAACATTAAGGGAAATGAGCGAACTGGGTCAGAGGTATCCTACCGGAATGATCGGTCCAAAGTTCTAGAGGAATTTCCTGATACTTTTGTACACTGGGTGACTAATGGACAGACACTTTGCCATTGA 2547 0.4232 MASSENEPSSHSPPTPPAHACMNKFRLYETLSNFYMIGRDYSRTYWRVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAICGHTVYAVSKSEMIPLRNSPVHSNITDSKNENRYKKLLCMVDLTKDFFFSYSYQIMRSLQRNLCDNETGHVLYETMFVWNEFLTRGIRNHLQNTLWTVALVYGFFKQDILTISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVPEGLPVQISSVVQNRGSIPLFWSQETSRLNLKPDIILSMKDPNYQATRLHFENLVKRYGNPIIILNLIKTHERKPRESILRTEFGNAIDFINKDLSEENRLRFLHWDLHKHFRSKSANVLLLLGKVAAYALTLTGFFYCQVTSTFRPEDCIKCPSRSFAYSNVDNGSFQPTRRDGVDKENADNLERKPSGGSSIVNGNHSVKPPIFQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIDHPKIDLDNPLSDDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQNAINVFLGHFQPQQGKPALWELGSDQHYDVGRHGDDDASLCGNSEMWFYRSIVKRCFSDGNILHESSTPMSAQNPKLEKFSKLGLLDQSEEESKVFCESSPEISTSESGMSFSRYTPSMPRRQLFGDMQRENFLESDHIFYSEHGESSSYSNFVDLDWLSSSGNSCEEEPFERSSITNSPIAGLSLENVNGVIIGGDTTSSTSDLESNIKGNERTGSEVSYRNDRSKVLEEFPDTFVHWVTNGQTLCH. 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03653 848 MobiDBLite consensus disorder prediction 446 480 - -
Seca6g03653 848 MobiDBLite consensus disorder prediction 797 818 - -
Seca6g03653 848 MobiDBLite consensus disorder prediction 797 816 - -
Seca6g03653 848 MobiDBLite consensus disorder prediction 453 467 - -
Seca6g03653 848 ProSiteProfiles Sac phosphatase domain profile. 161 558 IPR002013 GO:0016791
Seca6g03653 848 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 13 839 IPR043573 GO:0043813|GO:0046856
Seca6g03653 848 Pfam SacI homology domain 97 394 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03653 Seca-Chr6 103748284 103764681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03653 20 848 Acyl Lipid Metabolism Gene Families AT5G20840 62.455 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03653 K22913 - gmx:100786438 1417.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03653 6 103748284 103764681 Seca4g01161 4 18548719 18565882 ECH
Seca6g03653 6 103748284 103764681 Seca6g03653 6 103748284 103764681 ECH
Seca12g00562 12 5022688 5035467 Seca6g03653 6 103748284 103764681 PCT