Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03631 ATGGAAGAAAAAGTGTCAATTAAAAAATTGGGGGAAGTTGAGGAAAGGCCATGTCATAATAATACAGACACACCCAACGAATCCTCCATTCATAATACTGTGGGATCTACTGTACTGAGTTTGAGTCTGAATAATAACTCAGGACAACAAATTCAAGGACAGCCCCTCACCCAAATGGGGATGCTGCGAGTGAAGGTTGAGGAAGCGAAGAAGGAGAATGAGAAATTGAGGGGTATGGTGAATCAGATTAATGAACAATGCATTCATCTTCAGAATCGCTTACTTTCGGCCATCCACCACCATCAACTATCTTCATCATCACCTCCAAATAATAATCATCATCACTACTTGCTGAAGGGAAATAGAAGAGAAGATGAGGAGAAATTAGCAGTGTTACCCACCCGGCAGTTGTTAAATATGGGTGAGCCTGTAGGCGCATCTTCAGAATATTATTGCAGCAAAAGAGAAGGATTAATTGCCTCAGAGGAAAACACTGATCATATAAAGAAGCTTGGAGGTGAAATCAACAGCCAATTAATAACATCGCAAGAAGATCAAGCATCTTGCAGGAAAGCTAGAGTGTCCATAAGGGCACGATCTGATTTTTCTATGATGGGTGATGGGTGTCAATGGAGAAAGTATGGACAGAAGACAGCAAAGGGCAACCCTTGTCCCAGGGCCTACTATCGTTGCAGCATGGGAACTGCTTGTCCAGTTCGTAAGCAGGTGCAAAGGTGTTTTAAGGATGAGACTGTTCTCATCACAACCTATGAAGGGAACCATAATCATCCACTCCCACCAGCAGCTAGACCAATGGCAAACTCAACATCAGCTGCATTGAACATGTTCCTTTCTGGCTCAACCACAAGTTTACATGGCACCACTCTTTCAAACACACGCCTCTTCTCTTCATTATCTACCCCTGCTTCCACTGCTTTAGCTACTTTCTCCCCATCTGCAATATGTCCCACAGTAACACTGGACTTTACTCAACCCACTAATACCTATTTGCAATTCCAAAAGGCCACTTCACAATCCTTATTCCCTTTGCCAATGCAAGGTTACCCTCAAACATCTGAGGGGTTGCACTTGAGTTCTAACCTTCCAACCATGACAACCCCAGAGAAAAATAACCTTGCCTTGGTGGATGTTGTGAGTGAAGCTATATCCAAAGACCCTTCTCTCAAGGCAGCACTTTATGCAGCCATTTCCTCAGTCACTACTAAAGATCCTCAGGACATGATCAATAACCATAACCAACATGGTAAGGGTGGTTATGACCCTTGTTCTAAGATGCCTGCAATATTACCACCTCATCATTCCTACACCACTCAATTGATTTAG 1344 0.4315 MEEKVSIKKLGEVEERPCHNNTDTPNESSIHNTVGSTVLSLSLNNNSGQQIQGQPLTQMGMLRVKVEEAKKENEKLRGMVNQINEQCIHLQNRLLSAIHHHQLSSSSPPNNNHHHYLLKGNRREDEEKLAVLPTRQLLNMGEPVGASSEYYCSKREGLIASEENTDHIKKLGGEINSQLITSQEDQASCRKARVSIRARSDFSMMGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGNHNHPLPPAARPMANSTSAALNMFLSGSTTSLHGTTLSNTRLFSSLSTPASTALATFSPSAICPTVTLDFTQPTNTYLQFQKATSQSLFPLPMQGYPQTSEGLHLSSNLPTMTTPEKNNLALVDVVSEAISKDPSLKAALYAAISSVTTKDPQDMINNHNQHGKGGYDPCSKMPAILPPHHSYTTQLI. 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03631 447 MobiDBLite consensus disorder prediction 1 21 - -
Seca6g03631 447 ProSiteProfiles WRKY domain profile. 200 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca6g03631 447 Pfam WRKY DNA -binding domain 207 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca6g03631 447 MobiDBLite consensus disorder prediction 1 32 - -
Seca6g03631 447 Gene3D WRKY domain 189 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca6g03631 447 SUPERFAMILY WRKY DNA-binding domain 198 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca6g03631 447 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 54 419 IPR044810 GO:0003700
Seca6g03631 447 Coils Coil 59 93 - -
Seca6g03631 447 SMART WRKY_cls 205 265 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca6g03631 447 FunFam probable WRKY transcription factor 31 190 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03631 Seca-Chr6 103576278 103582857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03631 62 406 WRKY Transcription Factor Family AT4G04450 37.129 1.91e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca6g03631 WRKY 1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03631 - - gmx:100816719 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g03631 6 103576278 103582857 Seca12g00533 12 4718406 4723398 PCT