Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03613 ATGATAATGGTTCTCTGCATTGTTGTCTTTCCTCCTGACTGTACCATCATTATCATTTCATTTTGTCTCCATTTGCCTTCTAGCTTTTGGACACTTAAATACTGGATAACTAGGAAGTTGGAAGCAAATGGCTCAGATCATACAAGAAATGAAGATGTTCTATCTCGTCTGCTGGGGAACCTGGCAAGTCAGGCTGGTATAATTAATGGAAGTAATATGGCATCCTTATTGGAGGGATCTCAAGATTTGGTAAAAGCTGGGACATCTAGATCTGCACAAAATGTTCAAAACACAGATTCAAATGGTCCTGGACCATCCAGACCTTTCGGTTCTTCTATCAAGATGGGTAATGGTAAAATCCATCAGGACCCTCTGGAGTCTAGGTTACAGTGTGAGATGGTTCTTGCTAATGATATGACACAAAAATGTACACCTTCAGGCAGTGGTGGGGTTGGAAGTTCTAAACCTCCTTTGGGACCACAATCCTCAAATGTACTTCTGTCAAGGGGTAGCCCACCACCCCAATCAGTTGCAGCAGAGACTACAGTTGGAAGAAATGGCTTAAGTGATATTGACCTGAATAATGTATATGATGATGTGCAGGATTATGTTGAGAACCCCAGGAATTCTCATCCTCCTGTGGCTTCAGGGATTGGGCCTCTTGATCATCCTTTATGGGTACAATGTGACTCTCTCAAGTCAAGTCCACCACAGACAAGTAGAAACTCAGATTCAACCTCTACCCAGTCACCATCTAGCTCTAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTCTTTGGCAAGGATCCAAATGATTTTCCTCTTGTTCTTCGATCACAGATCCTTAACTGGTTATCCCACAGTCCCACAGAGATAGAGAGCTATATAAGGCCAGGCTGTATCATATTAACTATATATCTCCGCCTAGAAAATTCTGCATGGGAGGAGCTATGCTATAATCTAGGATCCAGCTTGAGAAAGCTTCTTGCTGCATCAAATGATTCTTTTTGGAGAACAGGATGGGTATACACAAGGGTGCGACACTCTGTAGCTTTTCTGTATAATGGTCAGGTGGTCTTAGATGTGCCATTGCGCCTCAAAAGCCCACAAAATTGTCAGATTTTGTGCATTACACCACTTGCTGTTTCTGCAAGTGCAAGTGCAAAATTTACTGTCAAAGGATTCAACCTTTTCCTGTCTAACACAAGGTTGCTCTGTGCACTTGAAGGGAAGTATCTGGTACAGGATAATTGTTATGATTTGATTGATGGTGCTGATGCAGCCATTGGACATCATGAGCTTCAGCATCTCAGCTTCTCTTGTCACATACCAAATATGACTGGAAGGGGGTTTATTGAGGTAGAAGATATTGGTCTTAGCAGCTGTTCCTTTCCATTCATAGTTGCAGAGCAAGAAATTTGTTCAGAAATATGTCAGCTGGAGAATGTCATTGAAGCAGCAGAGACTACTGATGACATCCAGATAAAAACCAAATTAATGGAAGAAAAAACTCGAGCATTGTATTTCATACAAGAAATGGGTTGGCTCCTTCATAGAAGTCATATGAAAGTTAGGCTAGGTCCAATGGCACCTGTCCAAGATCGCTTCCATTTTAACCAGTTCACATGGCTTGTTGGTTTCTCTATGGACCATAATTGGTGTGCTGTGATGAAAAAACTCTTAGATATTATCTTTGATGGTGCTGTTGATACAGGAAAGCATTCTTCCATTAAGCTTGCATTATTAGACATGGATCTTCTACACAGAGCTGTAAAGAGAAATTGCAGGCCTATGGTGGAACTACTGTTAAACTTTGTGCCAGTTAAAGCTCCAGATGGTGAAGACACTAAAGAGAAGCAAGCCAACAAGTCCCCTGACATATTCTTATTTAGACCTGATACTGTTGGGCCTGCTGGGTTGACACCCCTTCATGTTGCAGCGAGTACAAATGGCTCTGAGAATGTATTGGATGCATTAACTGATGATCCAGGAATGGTGGGAACTGAGGCATGGAAAAGTGCCAAGGACAATACAGGTTTGACACCCTATGACTATGCATCCCTGAGGGGCTACTACTCCTACATTCAACTTGTTCAAAGGAAAACAAGCAAGAAATGTGAAAGCCAGCATGTGCTTGATATCCCAAGCACCCTTGTAGACAGTAACATAAAGCAGAAGCAATCAGATGGGCACAGGTCATCAAAAGTTTCAAGTTTGCAGACTGAAATAACAGCAATGCCACACCAATGTGGGCTCTGCCAACACAAGCTGGCGTACGGTGGCGTGAGAAGGCCACTGGTTTATAGGCCGGCAATGCTGTCAATGGTGGCCATTGCAGCTGTATGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTCACCAAAAGTTTCTTATGTATTCCAGCCCTTCAACTGGGAATCATTGGAGTATGGGTCAATCTAA 2451 0.4268 MIMVLCIVVFPPDCTIIIISFCLHLPSSFWTLKYWITRKLEANGSDHTRNEDVLSRLLGNLASQAGIINGSNMASLLEGSQDLVKAGTSRSAQNVQNTDSNGPGPSRPFGSSIKMGNGKIHQDPLESRLQCEMVLANDMTQKCTPSGSGGVGSSKPPLGPQSSNVLLSRGSPPPQSVAAETTVGRNGLSDIDLNNVYDDVQDYVENPRNSHPPVASGIGPLDHPLWVQCDSLKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRSQILNWLSHSPTEIESYIRPGCIILTIYLRLENSAWEELCYNLGSSLRKLLAASNDSFWRTGWVYTRVRHSVAFLYNGQVVLDVPLRLKSPQNCQILCITPLAVSASASAKFTVKGFNLFLSNTRLLCALEGKYLVQDNCYDLIDGADAAIGHHELQHLSFSCHIPNMTGRGFIEVEDIGLSSCSFPFIVAEQEICSEICQLENVIEAAETTDDIQIKTKLMEEKTRALYFIQEMGWLLHRSHMKVRLGPMAPVQDRFHFNQFTWLVGFSMDHNWCAVMKKLLDIIFDGAVDTGKHSSIKLALLDMDLLHRAVKRNCRPMVELLLNFVPVKAPDGEDTKEKQANKSPDIFLFRPDTVGPAGLTPLHVAASTNGSENVLDALTDDPGMVGTEAWKSAKDNTGLTPYDYASLRGYYSYIQLVQRKTSKKCESQHVLDIPSTLVDSNIKQKQSDGHRSSKVSSLQTEITAMPHQCGLCQHKLAYGGVRRPLVYRPAMLSMVAIAAVCVCVALLFKSSPKVSYVFQPFNWESLEYGSI. 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03613 816 MobiDBLite consensus disorder prediction 140 192 - -
Seca6g03613 816 Gene3D - 568 718 IPR036770 -
Seca6g03613 816 MobiDBLite consensus disorder prediction 231 260 - -
Seca6g03613 816 MobiDBLite consensus disorder prediction 87 107 - -
Seca6g03613 816 MobiDBLite consensus disorder prediction 229 260 - -
Seca6g03613 816 MobiDBLite consensus disorder prediction 140 189 - -
Seca6g03613 816 SUPERFAMILY Ankyrin repeat 587 702 IPR036770 -
Seca6g03613 816 MobiDBLite consensus disorder prediction 87 120 - -
Seca6g03613 816 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 121 649 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03613 Seca-Chr6 103400524 103405982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03613 39 815 SBP-box Gene Family AT2G47070 46.684 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03613 - - gmx:100776125 1256.12