Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03606 ATGGGGAACGATTATTTGGTACATTTGGTGGTGTTGTTTTGCTTGGGGATGCTTATAACTTGCTTCTGCCAAGGTGATTCAGATGATGCTACTACGGCTGTGTATGTTGTTACTCTGAGACAAGCTCCTTCTTCTCATTACTATGGTGAGTTGAAAACTGTGGATAACGGCTTCAAACATGATGCTTCTGGGAGAACCCAATTTCAGAAACCAAGAAGATATGGCAATGATACAAAGACAGATGATAAGAGATATGGTTCTTACATTGCTCAAGTTCATGATTCTTTGTTGAAGAAAGTGTTGAATGGAGAGAAATATCTGAAGCTCTATAGCTACCATTACCTGATAAATGGATTTGCTGTGTTGGTTACCCAACAGCAGGCAGAGAAACTATCAAGGAGCAGTGAAGTGTCCAATGTGGTTTTGGATTTTCCTGTAAGAACTGCAACTACCCATACACCCCAATTTTTGGGTCTGCCACAGGGAGCATGGTCTCAAGATGGTGGGTTTGAAACTGCTGGAGAAGGAATTGTTATTGGGTTTATTGACACTGGCATAGATCCAACACATCCTAGTTTTGGTGATAGTAAATCAGAACATCCATATCCTGTTCCATCTCATTATTCTGGCATCTGCGAGGTTACTCGGGATTTTCCATCTGGTTCTTGCAATAGGAAACTTGTTGGGGCCCGTCATTTTGCAGCATCTGCTATAACCAGGGGAATATTTAATTCATCTCAGGACTATGCTTCTCCCTTTGATGGCGATGGCCATGGCACGCATACAGCATCTGTTGCAGCAGGAAACCATGGCATTCCAGTTATTGTTGCTGGGCATCACTTTGGGAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAAGCATTATACAAAAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATAAGCTTGTCAATTACTCCTAATAGGCGTCCTCCAGGTGTTGCAACTTTCTTCAATCCAATAGACATGGCATTGCTGTCAGCTGTAAAAGCTGGTATTTTTGTAGTGCAAGCTGCAGGAAATACTGGACCATCACCAATGAGCATGTCCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCCTCCCATGACCGGGTTTATAGCAATTCCATATTTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACCTGGCACAAAAGAAAACAAACTTTATAAGCTAATTCATGCTCACCATGCTTTGAACAATGACACAACGGATGGAGATGATATGTATGTTGGTGAGTGCCAAGATGCAAGTAAGTTCAATGAGGATTTGATCCAGGGGAACCTCTTGATCTGCAGCTACTCAATTCGATTTGTGCTGGGGATCTCCACTATCAAGCGGGCCTCAGAAACAGCCAAGAACCTTAGTGCAGCTGGCGTTGTCTTCTATATGGATCCTTATGTGATTGGTTTTCAGCTTAACCCAGTTCCAATGAAAATACCCGGCATCATAATTTCATCCACGAATGACTCCAAGATTTTAATGCAATACTACAATTCTTCATTGGAAATAGATGCAGTATCAAAGAAAGTTGTTAAATTTGGGGCTGTTGCCAGTATTTGTGGTGGACTAAAAGCAAACTATGGTAATGCTGCCCCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCATCAAGCTGACATTTTGAAACCTAACTTGTTAGCTCCTGGAAATTTTATATGGTCTGCTTGGAGTTCTCTTGGCACTGATTCAGTCGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGTATGGCTGCACCACATGTTGCTGGTCTTGCTGCACTTATTAGGCAAAAGTTCCCCAATATCAGTCCTGCAGCCATTGGATCTGCACTTTCTACTGCTGCTTCTCTGTATGACAGGAGTGGCGGGCCAATAATGGCTCAGCGATCATATGCCTCTCCCGATCTAAACCAATCTCCGGCAACTCCTTTTGACATGGGAAGTGGATTTGTAAATGCAACTGGGGCATTGAATCCGGGTTTGATTTTTGATTCCAGTTATGATGATTACATGTCATTTCTGTGTGGTATCAATGGTTCAGCTCCTGTGGTGCTAAACTTCACTGGGCAAAATTGTTGGCTTTATAATTCTACTGTATATGGTCCTGATCTGAACTTGCCTTCAATCACTCTATCAAAGCTAAACCAATCTAGAGTAGTGCAGAGGACTGTCCAAAACATTGCAGAAAATGAAACTTACAGTGTTGGTTGGGATGCTCCATATGGGGTTTCAGTGAAAGTATCTCCAACTCACTTCTCTATTGCCAATGGTGAGAAGCAGGTCTTGTCTGTACTCTTGAATGCAACCCTCAACAGTACTGTTCCCAGCTTTGGGAGGATTGGGTTGTTTGGTAATCAAGGTCATGTTGTCAGCATTCCTCTTTCAGTCATGCTTAAAACCTCAAATAACATCACTATGAGCTCTAACAGGGGATAG 2556 0.4284 MGNDYLVHLVVLFCLGMLITCFCQGDSDDATTAVYVVTLRQAPSSHYYGELKTVDNGFKHDASGRTQFQKPRRYGNDTKTDDKRYGSYIAQVHDSLLKKVLNGEKYLKLYSYHYLINGFAVLVTQQQAEKLSRSSEVSNVVLDFPVRTATTHTPQFLGLPQGAWSQDGGFETAGEGIVIGFIDTGIDPTHPSFGDSKSEHPYPVPSHYSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSSQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGAASHDRVYSNSIFLGNNVTIPGVGLAPGTKENKLYKLIHAHHALNNDTTDGDDMYVGECQDASKFNEDLIQGNLLICSYSIRFVLGISTIKRASETAKNLSAAGVVFYMDPYVIGFQLNPVPMKIPGIIISSTNDSKILMQYYNSSLEIDAVSKKVVKFGAVASICGGLKANYGNAAPKVMYYSARGPDPEDSLPHQADILKPNLLAPGNFIWSAWSSLGTDSVEFLGENFAMMSGTSMAAPHVAGLAALIRQKFPNISPAAIGSALSTAASLYDRSGGPIMAQRSYASPDLNQSPATPFDMGSGFVNATGALNPGLIFDSSYDDYMSFLCGINGSAPVVLNFTGQNCWLYNSTVYGPDLNLPSITLSKLNQSRVVQRTVQNIAENETYSVGWDAPYGVSVKVSPTHFSIANGEKQVLSVLLNATLNSTVPSFGRIGLFGNQGHVVSIPLSVMLKTSNNITMSSNRG. 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03606 851 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 179 190 IPR023827 -
Seca6g03606 851 Pfam Subtilase family 174 660 IPR000209 GO:0006508|GO:0008236
Seca6g03606 851 ProSiteProfiles Serine proteases, subtilase domain profile. 154 697 - -
Seca6g03606 851 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 104 835 IPR045051 -
Seca6g03606 851 Gene3D Peptidase S8/S53 domain 176 710 IPR036852 GO:0004252|GO:0006508
Seca6g03606 851 Gene3D - 389 557 - -
Seca6g03606 851 Pfam Peptidase inhibitor I9 34 149 IPR010259 -
Seca6g03606 851 PRINTS Subtilisin serine protease family (S8) signature 254 267 IPR015500 -
Seca6g03606 851 PRINTS Subtilisin serine protease family (S8) signature 619 635 IPR015500 -
Seca6g03606 851 PRINTS Subtilisin serine protease family (S8) signature 174 193 IPR015500 -
Seca6g03606 851 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 148 IPR037045 -
Seca6g03606 851 CDD Peptidases_S8_3 149 656 IPR034197 -
Seca6g03606 851 ProSitePatterns Serine proteases, subtilase family, serine active site. 620 630 IPR023828 -
Seca6g03606 851 Gene3D - 714 838 - -
Seca6g03606 851 FunFam Subtilisin-like protease SBT1.5 176 398 - -
Seca6g03606 851 CDD PA_subtilisin_like 398 530 - -
Seca6g03606 851 SUPERFAMILY Subtilisin-like 149 701 IPR036852 GO:0004252|GO:0006508
Seca6g03606 851 Pfam Fibronectin type-III domain 743 836 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03606 Seca-Chr6 103339739 103348136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03606 9 839 Subtilisin-like Serine Gene Family AT4G20430 69.158 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03606 - - gmx:100796456 1492.63