Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03584 ATGGAAGACGGTGACATTGAAGGCGGCGGAGAAGACGGTGGTTTTCGCTCACCGATCGGTCGCAAGTATCGTCCCGTGCTGGCGAACGATCGTGCTGTGCTCGAGATGTCTTCCATGGATCCGGGATCTTCTTCTTCGTCTTCTTCTGCCTTTCCAGATCAACCTCCTAATCTTAGAAAAATAAATGTAAGTAAGAGTGCGAATGGGAGTTCAGATGCTAAAGAAGGAAACTCTCTTCATCAATCACAACCTAATGGACCCCAGCAGGAATCTAAACTGGAACTGTTTGGTTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACTGGTGAGCAAGCTGCACAACCTCATAGTCCTAGAGATGGTGAGGATATTACAATCACTCAGGGGCTGCCAAAGCCTGCTGCTCCCAAACTGGGTACAATGATGGGTGTATTCATTCCATGTGTACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGTTGCTTGTTGCTCTTTGTGGCACTTGTACATTTCTTACTTCAATATCATTAAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGCGCTCTTGGTCCAGAAGTCGGAGTTAGCATTGGTCTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCACTCTATGTATTAGGAGCTGTAGAAACATTTTTGAAAGCGGTTCCTTCTGCTGGGATTTTTAGAGAGACTATCACACAAGTTAATGGTACTGCAATTGCGCGACCAATAGAGAGTCCAAGTTCACATGACCTGCAAATTTACGGGATTGTTGTGACTATTGTGTTATGCTTTGTTGTATTTGGAGGAGTGAAGATGATAAATCGAGTTGCGCCTGCTTTTCTCATACCTGTTTTATTCTCGCTCATCTGCATATATTTGGGAATTTTTTTGGCAAGGCATGATCATCCCGCAGGTTTGTTTTATTCTCACTGTTGA 1026 0.4415 MEDGDIEGGGEDGGFRSPIGRKYRPVLANDRAVLEMSSMDPGSSSSSSSAFPDQPPNLRKINVSKSANGSSDAKEGNSLHQSQPNGPQQESKLELFGFDSLVNILGLKSMTGEQAAQPHSPRDGEDITITQGLPKPAAPKLGTMMGVFIPCVQSILGIIYYIRFSWIVGMAGIGETLLLVALCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAIARPIESPSSHDLQIYGIVVTIVLCFVVFGGVKMINRVAPAFLIPVLFSLICIYLGIFLARHDHPAGLFYSHC. 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03584 341 Pfam Amino acid permease 146 326 IPR004841 GO:0016020|GO:0055085
Seca6g03584 341 MobiDBLite consensus disorder prediction 1 90 - -
Seca6g03584 341 MobiDBLite consensus disorder prediction 112 133 - -
Seca6g03584 341 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 81 329 IPR004842 GO:0006811|GO:0015377|GO:0016020
Seca6g03584 341 Gene3D Amino acid/polyamine transporter I 139 339 - -
Seca6g03584 341 MobiDBLite consensus disorder prediction 38 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03584 Seca-Chr6 103087582 103094919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03584 141 333 Inorganic Solute Cotransporters AT1G30450 82.902 1.68e-110 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03584 K14427 - gmx:100780371 547.354