Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03538 ATGTTGACTCTGAAAGGAGGAAGCAGACCACCATGGGTGGGGCTAGGAGCTGCGGTGTGGGTTCAGATTGCTTCAGGGAACACCTTCACTTTCCCTCTATATTCTCACTCTTTGAAGTCCGTTTTAGGTTTCAACCAGCGACAGCTCACACTTCTCGGTGTCGCTAACGATATCGGCGAGAACGTTGGCTTGATTCCTGGTCTTGCTTGTAACAAGTTCCCTCCATGGCTCATCCTTTGCGTCGGTTCTCTCGCCTCTTTCCTTGGCTACGGTCTTCTCTGGCTCGCTGTTACCCAAACACTCCCCAACCTCCCTTACTTGTTGCTATGGTTTGCTCTCGTTATTGCTTCCAACAGCAGTGCATGGTTAACCACTGCTGTTCTTGTGACCAACATGAGAAATTTCCCTGTTAGTAGAGGCAAAGTTGCAGGAATCCTGAAAGGCTATGGGGGGCTTAGTGCTGCGGTTTTTACTGAAATTTACAGCATAGTGCTTCATAGTTCTTCTACTAAGTTCCTGTTGTTTCTTGCCATTGGTATTCCTGTTGTTTGCTTCAGTATGATGTTTCTTGTTAGGCCATGTACTCCAGCTTCTGATGAAGACTCTACGGCAAATTGCCATTTTATATTTATCCAAGTTTCTAGTGTGGTCTTGGGCTTATATCTTCTTGTAACTACAATATTTGGTAATGCTCTTCAATTAAGTGATACAGTTTCCTATATTTTGGTGGCTGTGATGATTCTTCTTCTCATGGCTCCAATTGCTGTCCCTATAAAGATGACGCTCTTTCCTAAGAGAGCTTCCAATTCAGACTCACCTGATCAACGGCTTGGATCTTCTGACTCTCTCGTTCAAGGCAGAGATGAAAAAATAGAGCCCCTGCTAGCATCTTCGTCAGCAGGAAACCTTGGAGGTTTTAATGATCAGGATGATTCATCAGAGGTAGCTATGCTTCTTGCTTTAGGGGAGGGAGCAGTAAAGCAGAAGAAGCGAAGGCCTAAACGAGGGGAAGATTTTAAGTTTACTGAGGCTATAATAAAGGCTGATTTCTGGCTACTCTTTTTAGTTTATTTTGTTGGTGTTGGCACTGGGGTTACTGTTCTCAATAATCTTGCCCAAATTGGTATTGCACAAGGTGAGGAAGATACCACAATCTTACTGTCAATTTTCAGTTTTTGCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACAATCCCAAGGACAGCCTGGATGACATGCACACAGATAATTATGCTCATCGTGTACCTTCTATTTGCCTTTGCTGTCAAAGGAGCCCTTTATCCTGCAATTGCATTTCTTGGTGTCTGCTATGGTGTGCAAGTTTCCATAATGATACCCACTGTTTCTGAGCTTTTTGGTTTGAAGCACTTTGGAGTATTGAGCAACTTCATGGCAGTCGGAAATCCACTTGGTGCATTGCTTTTCTCAGCTCTGCTAGCTGGTTACATATATGATAATGAGGCAGCAAAGCAGCATGGTATTAACCTTTTTGCTTCGGGTGCTGCTTGCGTGGGTGCAAATTGCTTTAAGCTGACTTTCTTTATTCTTGCTGGTGTTTGTGCTGCTGGCATCATCTTGAGCATTATCCTGACTATGAGAATTAGGCCCGTTTACCAAATGCTTTATGCAGGAGGATCTTTCAGGCTGCCTCAAACATCTTCAAGTCACTGA 1719 0.4386 MLTLKGGSRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQLTLLGVANDIGENVGLIPGLACNKFPPWLILCVGSLASFLGYGLLWLAVTQTLPNLPYLLLWFALVIASNSSAWLTTAVLVTNMRNFPVSRGKVAGILKGYGGLSAAVFTEIYSIVLHSSSTKFLLFLAIGIPVVCFSMMFLVRPCTPASDEDSTANCHFIFIQVSSVVLGLYLLVTTIFGNALQLSDTVSYILVAVMILLLMAPIAVPIKMTLFPKRASNSDSPDQRLGSSDSLVQGRDEKIEPLLASSSAGNLGGFNDQDDSSEVAMLLALGEGAVKQKKRRPKRGEDFKFTEAIIKADFWLLFLVYFVGVGTGVTVLNNLAQIGIAQGEEDTTILLSIFSFCNFVGRLGGGVVSEHFVRTKTIPRTAWMTCTQIIMLIVYLLFAFAVKGALYPAIAFLGVCYGVQVSIMIPTVSELFGLKHFGVLSNFMAVGNPLGALLFSALLAGYIYDNEAAKQHGINLFASGAACVGANCFKLTFFILAGVCAAGIILSIILTMRIRPVYQMLYAGGSFRLPQTSSSH. 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03538 572 Pfam Nodulin-like 11 258 IPR010658 -
Seca6g03538 572 CDD MFS_Mch1p_like 10 540 - -
Seca6g03538 572 SUPERFAMILY MFS general substrate transporter 232 552 IPR036259 -
Seca6g03538 572 Gene3D MFS general substrate transporter like domains 346 554 IPR036259 -
Seca6g03538 572 SUPERFAMILY MFS general substrate transporter 16 196 IPR036259 -
Seca6g03538 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03538 Seca-Chr6 102581651 102585021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03538 2 572 Nodulin-like Gene Family AT1G80530 56.469 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03538 - - gmx:100794012 914.45