Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03510 ATGTGTGATGAAGAATTGAGACTTGTAGTTGGTGCGGTTTTTGATACTTTAGAAGAAGCAGAAAACTTTTATAAAAGGTATGCACATGCTGCTGGTTTTAGTGTACGTAAGTCATCTGAAACAAAAGATAAAAATGGTGCAAAGTGGAAATATTTTCTTTGTTCAAAACAATGTTTTAAAGTTGAGAAAAAAAAAAGTTCAATGGAAGAAAAATATGAAGTTGTGCGATTTCATGAAGTTCATACACATGCATTAGCCACACCTAGAAAGAAACAATTCTTAAGATCTGCTAGAGAAGTAAGCAATGTTCACAAGAATTTATTGCTTTGCTATAATAGAGCCAATGTAGGGCCTTCAAAAGCTTATCAATTATCGAAAGAGCAAATTGAGGGTTATGATAATATTAGATGCACAAAAAGGGATCTCCAGAATTATTCTAGGGATTTAAAAGACTTGATCAAAGTCTCTGATGCACATATGTTTATTGATAATTTTAGGAGTAAGCATGAGATGAACCATTCATTTTACTATGATTATAAGGTTGATAATGAAGGCAAGTTGAAAAATGTGTTTTGGGCAGATGACCTTTGTCAAAAAAATTATTCTTTATTTGGAGATGTTATTTCATTTGATACTACATACAATACAAACAAATATTGCATGATTTTTGCACCATTCACTGGCATAAATCATCATCGGCAGAGCATAACTTTTGGGGATGCATTGTTAGCAGATGAAAAAGCTGAATCATTTGTGTGGTTGTTTGACACATTTTTAAAAGCAATGGGAGGACATAAACCTATTGTGATCATAACAGATCAAGACCCAGCTATGAAGATCACAATAGAGATAGATTTTGCATGTGGCACATTATGA 876 0.3265 MCDEELRLVVGAVFDTLEEAENFYKRYAHAAGFSVRKSSETKDKNGAKWKYFLCSKQCFKVEKKKSSMEEKYEVVRFHEVHTHALATPRKKQFLRSAREVSNVHKNLLLCYNRANVGPSKAYQLSKEQIEGYDNIRCTKRDLQNYSRDLKDLIKVSDAHMFIDNFRSKHEMNHSFYYDYKVDNEGKLKNVFWADDLCQKNYSLFGDVISFDTTYNTNKYCMIFAPFTGINHHRQSITFGDALLADEKAESFVWLFDTFLKAMGGHKPIVIITDQDPAMKITIEIDFACGTL. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03510 291 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 286 IPR031052 GO:0006355
Seca6g03510 291 Pfam MULE transposase domain 207 286 IPR018289 -
Seca6g03510 291 Pfam FAR1 DNA-binding domain 22 67 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03510 Seca-Chr6 102296643 102297614 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca6g03510 MULE 3.3e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03510 - - mtr:112420857 375.941