Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g03504 | ATGCATTCCTCTTGCAACAAAACAAAAATATACATAACTTATTTTATACTGACACCATTGCCTTTGCTTGGGGTAGTTACAATTGTCCCTCTTCCTTCTTCTCTTCAAGTTCCAATGGAGATTTTCAAATGCTTGTACATCAATCTTCTCGCTACTTTCATGCTATCAGCAGTTTTAGCAATCGACCCTTATTCAGAAGCACTCCTGAGCCTAAAATCTGAACTTGTAGATGATGATAACAGCTTGCATGACTGGGTGGTGCCACCCTCTGGAGGCAGCTTAACTGGGAAATCCTATGCATGTTCTTGGTCTGGTATCAAGTGTGACAAGGACTCAACAATTGTAACTTCCATAGACCTGTCTATGAAGAAACTTGGGGGTGTATTATCAGGGAAGCAATTTAGCGTCTTCACAAAGCTTGCTGATCTCAACCTGAGCCACAATTTCTTCTCTGGGCAGCTGCCAGCTGAAATTTTCAACCTCACCAGCCTAAAGAGCTTGGATATCAGCAGAAACAATTTTTCTGGTCACTTCCCAGGGGGAATTCCCAGACTCCAAAATTTGGCTGTGCTTGATGCCTTTAGCAACAGCTTTTCAGGGCCATTGCCTGCTGAATTTTCACAGCTAGAATATCTCAAGGTTCTTAATCTGGCTGGGAGTTACTTCAGAGGATCAATTCCATCTGAATATGGTTCTTTCAGAAGCCTTGAGTTTCTTCATCTAGCAGGAAATTCTCTCACAGGAAGTATACCTCCAGAACTGGGTAACCTCAAAACAGTGACCCACATGGAGATTGGCTACAACTTTTACCAGGGTTTTATTCCACCCCAACTAGGTAACATGAGCCAGCTTCAGTATCTTGACATAGCAGGTGCAAATCTTTCCGGTCCAATACCAAAGGAGCTCTCCAATCTCACCAGTTTGCAATCACTTTTTCTGTTCAGAAACCAGCTCACAGGTTCAATACCAAGTGAGTTCAGAAAAATCAAACCTCTCATAGATTTAGATCTCTCTGATAACTTCCTTTCAGGGTCCATTCCTGAAAGCTTTTCAGAGCTGAAGAACCTAAGACTGCTCAGTCTCATGTACAATGACATGAGTGGCACTGTTCCCGAAGGCATTGCACAACTTCCATCCTTGGAAACTCTTCTCATTTGGAACAATCGCTTCTCTGGATCACTTCCACAGAGCTTAGGCAGGAACTCCAAACTCAAATGGGTGGATGTCTCCACAAACAATTTCATTGGCAGCATACCCCCAGACATTTGTGTGAATGGAGAACTATTTAAGCTTATCCTGTTTTCTAACAAATTTACAGGTGATCTTTCATCAATCTCCGACTGTCCTTCCCTTGTTCGTCTTCGCCTAGAAGATAATTCATTCTCAGGAAAGATCCCTTTAAAATTCAGCCATCTTCCTGATATCTCATACGTTGATCTGTCCAGGAACAATTTTGTTGGTGGGATTCCCTCAGATATTTCTCAAGCTACTCAACTGGAGTATTTCAATGTCTCTTATAATCTGCAATTAGGGGGAACCATCCCTGCAAAAGTGTGGTCTTTGCCCCTACTTCTAAATTTTTCAGCATCTTCTTGTGGTATTTTAGGCAATCTTCCCCCATTTGAGTCCTGCAAATCAATATCAGTTATTGATCTTGATAGGAACAACTTATCTGGAATCATCCCAAACAGTGTTTCCAAATGTCAAGCTCTTGAGATAATCAAATTATCTGACAATAATATGACAGGTCAAATACCTGAGGAGCTTGCCAGTATCCCTGTTCTTGGTGTAGTAGACTTGTCTAACAATAAGTTCAATGGCCCCATACCTGCAAAGTTTGGTAGTTCTTCAAGTTTACAACTTTTCAATGTGTCTTTCAACAATATGTCTGGTTCAATACCCAAAGGAAAGTCATTCAAATTAATGGGTAGCAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAGAACCTCTGAGACCATGTTCTGATTCAGTCGGAATATTGGGCAGCAAAGGCACGTGGAAGCTTACACGTATTGTTCTACTCTCTGTAGGGTTGCTAGTAATCCTTCTAGGATTGGCTTTTGGAATACTTTATTTTAGGAAGGGTGTCAAAAGTCAATGGAAGATGGTTTCATTTGTTGGACTCCCTCAATTCACAGCAAATGATGTTTTGACAAGCTTCAGTGCCACAAAACCAACAGAAGTTCTATCACCATCACCTGAAGTTACAAAAGCAGTTCTGCCAACAGGAATAACAGTTTTAGTCAAGAAGATTGAATGGGAAGCAAGGAGTATTAAGGTGGTATCAGAATTTATAATGCGACTAGGAAATGCAAGGCACAAGAATTTAATCAGACTGTTGGGTTTTTGCCACAACCAGCATCTAGTCTATCTTTTGTATGACTACTTGCCCAATGGGAATTTGGCTGAGAAAATTGGAATGAAATGGAATTGGGCAGCTAAATTCAGAACAGTGGTTGGAATTGCAAGGGGTCTTTGCTTCCTTCATCATGACTGTTACCCACCTATACCCCATGGAGACTTGAAGTCCAGCAATGTTGTGTTTGACGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAACATGTGTTGAAGTTGAGTAAAGGCTCATCTCCAACCAAAACTAACCGGGAAACAGAATACAATGAAGGCATGAAAGAGGAACTCTGCATGGATGTCTACAAATTTGGGGAGTTGATACTGGAAATTTTAACTGGTGGAAGGTTGACAATTGCAGAATCTAGCATTCACAGCAAATCAAGGGAGGTTCTTCTAAGAGAAGTTTACAATGATGATGAAGTGAGTTCCGCAAGTTCATTGGAAGAAATTAAACTGGTTCTTGAGGTTGCTATGCTTTGCACTAGAAGCAGATCATCCGATCGGCCATCCATGGAAGATGCACTGAAGCTTTTGTCAGGGTTAAAGAGTCTAGAAGATGGCAGAACTTCAAAAGAAGGGAAATAA | 2991 | 0.4116 | MHSSCNKTKIYITYFILTPLPLLGVVTIVPLPSSLQVPMEIFKCLYINLLATFMLSAVLAIDPYSEALLSLKSELVDDDNSLHDWVVPPSGGSLTGKSYACSWSGIKCDKDSTIVTSIDLSMKKLGGVLSGKQFSVFTKLADLNLSHNFFSGQLPAEIFNLTSLKSLDISRNNFSGHFPGGIPRLQNLAVLDAFSNSFSGPLPAEFSQLEYLKVLNLAGSYFRGSIPSEYGSFRSLEFLHLAGNSLTGSIPPELGNLKTVTHMEIGYNFYQGFIPPQLGNMSQLQYLDIAGANLSGPIPKELSNLTSLQSLFLFRNQLTGSIPSEFRKIKPLIDLDLSDNFLSGSIPESFSELKNLRLLSLMYNDMSGTVPEGIAQLPSLETLLIWNNRFSGSLPQSLGRNSKLKWVDVSTNNFIGSIPPDICVNGELFKLILFSNKFTGDLSSISDCPSLVRLRLEDNSFSGKIPLKFSHLPDISYVDLSRNNFVGGIPSDISQATQLEYFNVSYNLQLGGTIPAKVWSLPLLLNFSASSCGILGNLPPFESCKSISVIDLDRNNLSGIIPNSVSKCQALEIIKLSDNNMTGQIPEELASIPVLGVVDLSNNKFNGPIPAKFGSSSSLQLFNVSFNNMSGSIPKGKSFKLMGSSAFVGNSELCGEPLRPCSDSVGILGSKGTWKLTRIVLLSVGLLVILLGLAFGILYFRKGVKSQWKMVSFVGLPQFTANDVLTSFSATKPTEVLSPSPEVTKAVLPTGITVLVKKIEWEARSIKVVSEFIMRLGNARHKNLIRLLGFCHNQHLVYLLYDYLPNGNLAEKIGMKWNWAAKFRTVVGIARGLCFLHHDCYPPIPHGDLKSSNVVFDENMEPHLAEFGFKHVLKLSKGSSPTKTNRETEYNEGMKEELCMDVYKFGELILEILTGGRLTIAESSIHSKSREVLLREVYNDDEVSSASSLEEIKLVLEVAMLCTRSRSSDRPSMEDALKLLSGLKSLEDGRTSKEGK. | 997 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g03504 | 996 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 719 | 803 | - | - | |
Seca6g03504 | 996 | ProSiteProfiles | Protein kinase domain profile. | 708 | 983 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca6g03504 | 996 | Pfam | Protein tyrosine and serine/threonine kinase | 750 | 978 | IPR001245 | GO:0004672|GO:0006468 | |
Seca6g03504 | 996 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 844 | 856 | IPR008271 | GO:0004672|GO:0006468 | |
Seca6g03504 | 996 | Gene3D | Ribonuclease Inhibitor | 508 | 665 | IPR032675 | - | |
Seca6g03504 | 996 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 212 | 974 | - | - | |
Seca6g03504 | 996 | Gene3D | Ribonuclease Inhibitor | 262 | 507 | IPR032675 | - | |
Seca6g03504 | 996 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 804 | 988 | - | - | |
Seca6g03504 | 996 | Gene3D | Phosphorylase Kinase; domain 1 | 739 | 801 | - | - | |
Seca6g03504 | 996 | SMART | serkin_6 | 742 | 980 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca6g03504 | 996 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 227 | 331 | - | - | |
Seca6g03504 | 996 | SUPERFAMILY | RNI-like | 117 | 440 | - | - | |
Seca6g03504 | 996 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 350 | 663 | - | - | |
Seca6g03504 | 996 | SUPERFAMILY | L domain-like | 347 | 654 | - | - | |
Seca6g03504 | 996 | Gene3D | Transferase(Phosphotransferase) domain 1 | 802 | 994 | - | - | |
Seca6g03504 | 996 | FunFam | Leucine-rich repeat receptor-like protein kinase | 64 | 226 | - | - | |
Seca6g03504 | 996 | Pfam | Leucine rich repeat | 547 | 605 | IPR001611 | GO:0005515 | |
Seca6g03504 | 996 | Pfam | Leucine rich repeat | 307 | 365 | IPR001611 | GO:0005515 | |
Seca6g03504 | 996 | Gene3D | Ribonuclease Inhibitor | 186 | 261 | IPR032675 | - | |
Seca6g03504 | 996 | Gene3D | Ribonuclease Inhibitor | 63 | 185 | IPR032675 | - | |
Seca6g03504 | 996 | SMART | LRR_typ_2 | 233 | 257 | IPR003591 | - | |
Seca6g03504 | 996 | SMART | LRR_typ_2 | 305 | 328 | IPR003591 | - | |
Seca6g03504 | 996 | SMART | LRR_typ_2 | 377 | 401 | IPR003591 | - | |
Seca6g03504 | 996 | SMART | LRR_typ_2 | 161 | 185 | IPR003591 | - | |
Seca6g03504 | 996 | Pfam | Leucine rich repeat N-terminal domain | 66 | 109 | IPR013210 | - | |
Seca6g03504 | 996 | SUPERFAMILY | Protein kinase-like (PK-like) | 742 | 980 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g03504 | Seca-Chr6 | 102247416 | 102251373 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g03504 | 42 | 981 | Receptor kinase-like Gene Family | AT5G51350 | 54.774 | 0.0 | 967 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Seca6g03504 | PK_Tyr_Ser-Thr | 2.7e-16 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g03504 | - | - | aprc:113852384 | 1687.55 |