Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03493 ATGGATCTCTCGATTGAGTATCTGCACGCAGCGATTGCCGTAGCAGTTGGCATACTATTGATTTCTTACATAACGAAGAGGACTAGATCAGCAGCAGCACGACGAAACACACCACCCGTAGCTACTGGTGGATGGCCTTTGATCGGTCACCTTCCCCTGTTAGGTGGTTCAGGTGGTCAACCTCCTTACATAGCCTTAGGAGCCTTAGCAGACAAGTATGGACCCATCTTCAGCATCCGAATCGGAGTGCACCCTGCTGTGGTCGTCAGTACTTGGGAGCTAGCCAAGGATATTTTCACCACTCACGATCTCATCATCTCCTCTCGTCCCAAATTCACCGCCGCCAAAATATTGGGACATGACTACGCTAACTTCGGCTTCTCCCCTTACGGAGAATACTGGCGCGTCATGCGTAAGGTAACCGCCTCAGAGCTTCTTTCCACGCGCCGCTTAGAATCTTTTCGGGATATTAGGGATTCCGAGGTGAAGAGCTGGGTGGAAGAGCTCTACAGCGCGTGGGGGAGGGACAAAAGTGGTGGTGATAGTGAGTTCGTGGTGGAGATGAAGAAGTGGTTCGGGGATTTGAATTTGAACGTGATTTTAAGGATGGTTGCTGGGAAGCGATACAAATTAAGTGGAAGTACGGATGAGATTGAGAGAGAGGTGCGGAGGGTGAGGAGGGTTTTCAGAGAGTGGTTTCGTTTGACAGGGTTGTTTGTGGTTGGCGACGCAATCCCTTTTCTTGGGTGGCTTGATTTGGGAGGACATGTGAAGGAGATGAAGAAAACCGCTGAGGAAATGGAAAGCGTGATTTGTGAATGGTTAGAAGAACATCGCAGAAAGAGAGATTCAGGGGAGACTAATAAAACAGAGCAGCAGGACTTTCTTGATGTCTTGATATCTGTACTTGGTAGCGCTGACCTTGCTGGTTATGACGTTGATACCGCTATCAAATCCACATGTTTGACGCTAATTGCTGGAGGAACGGACACTACAGCGGTTACTATGACATGGGCGCTATCGTTATTGTTGAATAATCACCATGCTTTGAAGAAAGTTCAAGAGGAGCTAGATGAGCAAGTGGGCAAGGAAAGGCTTGTGAAAGAATCAGACATCAACAACTTGGTTTATCTTCAAGGTGTAGTTAAAGAAACGCTACGATTGTATCCAGCTGGGCCACTCGGAGGTGCGCGTGAATTCTCTGAAGATCTTACTTTAGGTGGATACCATATCCAAGCAGGTACTCGAATGATTTTGAACCTTTGGAAGATGCATAGAGATCCACGTGTATGGTCAGACCCATTAGAGTTTAAACCAGAGAGGTTCTTGACTACCCATAAGGATGTGGATGTGAAGGGTAAGCATTTTGAGCTACTTCCCTTTGGTGGTGGAAGAAGGTCCTGCCCCGGCATATCATATGGCCTTCAAATGTCACACTTGGCATTAGCTGCTTTCTTGCAAGCATTTGAGATCACAACCCCCTCTAATGCCCAAGTTGATATGAGCGCCACGTTTGGACTCACGAACATCAAAACCACCCCACTTGAGATTTTGGCAAAACCTCGTTTACCATACCACCTTCTCTTTGTGGATCAACCTCAACCAAGTTGCAATAACCTTCGATAA 1626 0.4723 MDLSIEYLHAAIAVAVGILLISYITKRTRSAAARRNTPPVATGGWPLIGHLPLLGGSGGQPPYIALGALADKYGPIFSIRIGVHPAVVVSTWELAKDIFTTHDLIISSRPKFTAAKILGHDYANFGFSPYGEYWRVMRKVTASELLSTRRLESFRDIRDSEVKSWVEELYSAWGRDKSGGDSEFVVEMKKWFGDLNLNVILRMVAGKRYKLSGSTDEIEREVRRVRRVFREWFRLTGLFVVGDAIPFLGWLDLGGHVKEMKKTAEEMESVICEWLEEHRRKRDSGETNKTEQQDFLDVLISVLGSADLAGYDVDTAIKSTCLTLIAGGTDTTAVTMTWALSLLLNNHHALKKVQEELDEQVGKERLVKESDINNLVYLQGVVKETLRLYPAGPLGGAREFSEDLTLGGYHIQAGTRMILNLWKMHRDPRVWSDPLEFKPERFLTTHKDVDVKGKHFELLPFGGGRRSCPGISYGLQMSHLALAAFLQAFEITTPSNAQVDMSATFGLTNIKTTPLEILAKPRLPYHLLFVDQPQPSCNNLR. 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03493 541 PANTHER CYTOCHROME P450 82C3-RELATED 16 527 - -
Seca6g03493 541 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 FunFam Cytochrome P450 82C4 28 520 - -
Seca6g03493 541 CDD CYP82 74 522 - -
Seca6g03493 541 Gene3D Cytochrome P450 27 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 Pfam Cytochrome P450 38 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 SUPERFAMILY Cytochrome P450 44 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03493 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03493 Seca-Chr6 102134479 102136547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03493 1 528 Cytochrome P450 AT4G31940 48.405 5.51e-175 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03493 - - gmx:100810391 741.11