LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca6g03481	ATGGGCCATGCTAAACTGGGTGAAAGATCTCCCCCACCAAGAATTGAAGGACCAGGGGAAAAGAATCTGCAACTTCATTTCAGAACAAAAATGCCACCTCACTTGTTCACAGGGGGGAAGGTTGAGGGAGAGCAAGGAGCAGCTATCCATGTTGTTTTACTGGAGCCAAACACAGGCGATGTTGTTCAAGTTGGACCAGAATCAGTTGCTAAATTGAATGTTGTTGTACTTGAAGGTGACTTTAGTGAGGAAGCTGATGATGATTGGACAAAAGAACACTTTGAAAGCCATGAAGTAAAGGAACGTGAGGGGAAAAGACCACTTCTAACTGGAGATTTGCAAGTTAGCTTAAAAGAAGGGGTAGGAACCTTAGGTGATCTTACTTTCACTGACAATTCTAGCTGGATAAGAAGCAGAAAATTCAGGCTTGGTGTTAAGGTTGCTCCTGGTTATTGTGAGGGAATTCGTGTGCGCGAAGGAAAGACTGAAGCCTTTGCTGTCAAAGATCACAGAGGAGAATTATACAAGAAACACTATCCACCAGCTTTGCATGATGAAGTATGGAGATTGGATCGGATAGCCAAGGATGGGGCACTTCACAAAAAACTGATTCAAGCAAAAATATTGACTGTAGAAGATTTCCTGCGCCTTCTTGTCCGCGAACCACAGAAATTAAGAAGTATACTTGGCAGTGGAATGTCCAACAGGATGTGGGAGAACACTGTGGAGCATGCCAAGACATGTGTCTTGGGTGGTAAGCTGTTTGTTTTCTACACTGATGAATCTCATAACACTGGCATTGTGTTCAACAACATATATGAGCTGAGAGGCCTCATTGCTGATGGCCAGTTCTACTCTTTGGAATCACTTACTCCAAATCAGAAGGTCAATTTTCTTCACTAA	903	0.4308	MGHAKLGERSPPPRIEGPGEKNLQLHFRTKMPPHLFTGGKVEGEQGAAIHVVLLEPNTGDVVQVGPESVAKLNVVVLEGDFSEEADDDWTKEHFESHEVKEREGKRPLLTGDLQVSLKEGVGTLGDLTFTDNSSWIRSRKFRLGVKVAPGYCEGIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKILTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVFYTDESHNTGIVFNNIYELRGLIADGQFYSLESLTPNQKVNFLH.	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca6g03481	300	Pfam	Calmodulin binding protein central domain	182	248	IPR046830	-
	Seca6g03481	300	MobiDBLite	consensus disorder prediction	1	20	-	-
	Seca6g03481	300	Pfam	Calmodulin binding protein C-terminal domain	253	296	IPR046829	-
	Seca6g03481	300	PANTHER	OS02G0177800 PROTEIN	11	297	IPR012416	GO:0005516
	Seca6g03481	300	Pfam	Calmodulin binding protein-like N-terminal domain	23	170	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca6g03481	Seca-Chr6	101983039	101988562	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca6g03481	1	297	Calmodulin-binding Proteins	AT2G24300	76.846	2.19e-170	484

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca6g03481	-		-	gmx:100775528	561.222