Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g03429 | ATGCAGCAAGGTGATCCAACGGTCCTGAGCTTGAGGCCTGGTGGTGGGCGTGGCGGCGGAAGCAGGCTTCTCGGTCACTCCTCATCATCTTCATCCTCTACTTCTCACTCTGATCTTCCTCTGTTGCGTCCCCATGGCGCTGCTCTTTCTTCTTTCTCTCTCAAGGAATGGAAGTTAAGATCCATAAGACAAAGGGGAAGCCTGAAGTTGAATGTCCTGATTCTTGGTGGGTGCACTCAGTTATGTGTACCTGCTGTAAATATGGACAGAAAGCAATATACTGGAGATTCACGGTTTGAAGGTCGTGAGCGTGTGCGATATACCAGAGAGCAGCTTTTACAGCTTAGAGAGGCTGTCGAGGTCCCTGACGATATTCTAAAGATTAAACAAGACATAGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGCCGTGCTGAAAGCAATCCTCCACATCAATTACAAAATCGATATTCTGAGCCAGACAACCGTGACTGGCGTGGTCGTTCTGGACAACTTCCTCCTAATCCAGATGAGAGGTCTTGGGAAAACCTCAGAGATAACAAGGAGCTTGGTAATAGATTTGACTCTAGACACCAGGATGCTAGTCAGGTTAATCGCCAAGATCAACTTAATTCTCAGTTTGCAAGGGCACAGATATCTTCTAATCAAGGGGGAGGATCTGTGCCTACTCTAGCCAAGGCTGAAGTTCCATGGTCAGCTAGAAGGGGAAGCCTCTCTGAGAAGGATCGCGTCCTGAAAACTGTAAAAGGAATACTAAATAAGTTGACTCCTGAGAAGTTTGATCTCTTGAAGGGTCAATTAATCGATTCTGGCATTACATCAGCTGACATCTTGAAGGGTGTCATTTCGCTTATATTTGATAAGGCTGTTCTAGAACCAACATTTTGCCCCATGTATGCTCAGCTGTGCTCTGATCTTAATGAGAAGCTTCCTCCATTCCCATCTGAAGAACCTGGTGGGAAAGAAATCACTTTTAAGAGAGTACTCTTGAATATTTGCCAGGAGGCTTTTGAAGGTGCTTACAATATGAGGGAGGAAATAAAACAGATGACTGCCCCTGAGCAGGAGATGGAGCGTACAGACAAGGAAAGACTGATCAAGCTTCGCACCCTTGGAAATATTCGTTTAATTGGTGAGCTTTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCCCCAGACAGCAAGGCTTGTCCAGTTGAGGAAAATGTTGAAGCCATTTGTCAGTTTTTCAATACTATTGGCAAGCAGCTTGATGAAAGTCCAAAATCACGGCGAATAAATGATATGTATTTTAGCCGTTTGAAAGAACTATGCACAAACCCCCAACTTGTACCACGGCTCAGGTTCATGCTTCGGGATGTTCTAGATTTGCGTGCAAATAACTGGGTTCCTAGACGCGAAGAGATGAAAGCGAAAACCATCACTGAAATTCATTCGGAGGCAGAAAAAAATCTTGGATTGCGCCCAGGTGCTACTGCTAATATTAGAAATGCCCGTGGAGGTGTTCAAGGAAATGTCGGCCCAGGGGGCTTCCCCATTGCTCGACCAGGTACAGGGGGTTTGATGCCTGGAATGCCAGGGACCAGGAAGATGCCTGGGATGCCCGGAATTGATAATGATAACTGGGAGATTCCTAGGACTAGATCTATGCCAAGAGGAGACTTGTCAGGTAATCAAGCTTCAGGACGCAGCAACTCTTCTTTTCCTTCCAAGTCCACAACCTTGAATTCAAAATTGCTTCCTCAAGGTAGTGTTGGTATTATAAGTGGAAGAAGTAGTGCCCTTGTTCATGGAGGTGGTCCAGTTTCTGCTCGCCCATCAAACTTTGGTTCAGGTATTGAGGCTGCACCTCAATTCTCTTCACCTGCTAAACCAGTTTCTGCTGTGTCCTCAGAGAAGCCACAGGCTCCAGCTGTAAAATTGAATCTTGATGATCTTCACCGCAAAACCGTCTCTCTTCTGGAAGAATATTTCAGTGTTCGGATTTTGGAAGAGGCATTACAATGTGTGGAGGAATTAAAATCTCCAGCTTACCACCCTGAGTTTGTTAAGGAAGCCATTTCTCTTGCACTTGATAAAAGTCCACCATGTGTTGAACCCATTGCCAATCTTCTTGAGTATCTCTTTATTAAGAAGATTCTTACAGCCAGAGACATAGGGACTGGGTGTTTGTTATTTGGTTCTTTGCTGGATGACATTGGCATAGATTTACCTAAAGCACCAAGTAATTTTGGTGAGATAATTGGGAAACTAATTTTGGCTGGGGGGTTGGATTTTAAGGTGGTGACAGAGATTCTCAAGAAAGTGGATGATGACCTGTTTCAGAGAGCAATATTTGACAGTGCAATACGAGTAATTAGATCTGCCTCTGGGCAAGCTGTATTGGTATCACAAATATCTGATATTGAGGCCTGCCAGAGTCTGCTCAAGTGA | 2487 | 0.4467 | MQQGDPTVLSLRPGGGRGGGSRLLGHSSSSSSSTSHSDLPLLRPHGAALSSFSLKEWKLRSIRQRGSLKLNVLILGGCTQLCVPAVNMDRKQYTGDSRFEGRERVRYTREQLLQLREAVEVPDDILKIKQDIEAELFGEDQSWGRAESNPPHQLQNRYSEPDNRDWRGRSGQLPPNPDERSWENLRDNKELGNRFDSRHQDASQVNRQDQLNSQFARAQISSNQGGGSVPTLAKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEEPGGKEITFKRVLLNICQEAFEGAYNMREEIKQMTAPEQEMERTDKERLIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKACPVEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELCTNPQLVPRLRFMLRDVLDLRANNWVPRREEMKAKTITEIHSEAEKNLGLRPGATANIRNARGGVQGNVGPGGFPIARPGTGGLMPGMPGTRKMPGMPGIDNDNWEIPRTRSMPRGDLSGNQASGRSNSSFPSKSTTLNSKLLPQGSVGIISGRSSALVHGGGPVSARPSNFGSGIEAAPQFSSPAKPVSAVSSEKPQAPAVKLNLDDLHRKTVSLLEEYFSVRILEEALQCVEELKSPAYHPEFVKEAISLALDKSPPCVEPIANLLEYLFIKKILTARDIGTGCLLFGSLLDDIGIDLPKAPSNFGEIIGKLILAGGLDFKVVTEILKKVDDDLFQRAIFDSAIRVIRSASGQAVLVSQISDIEACQSLLK. | 829 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g03429 | 828 | SMART | ma3_7 | 664 | 776 | IPR003891 | - | |
Seca6g03429 | 828 | MobiDBLite | consensus disorder prediction | 570 | 595 | - | - | |
Seca6g03429 | 828 | Gene3D | - | 657 | 824 | - | - | |
Seca6g03429 | 828 | MobiDBLite | consensus disorder prediction | 140 | 183 | - | - | |
Seca6g03429 | 828 | MobiDBLite | consensus disorder prediction | 617 | 649 | - | - | |
Seca6g03429 | 828 | Pfam | MA3 domain | 665 | 776 | IPR003891 | - | |
Seca6g03429 | 828 | Gene3D | - | 244 | 480 | - | - | |
Seca6g03429 | 828 | ProSiteProfiles | MI domain profile. | 663 | 785 | IPR003891 | - | |
Seca6g03429 | 828 | SUPERFAMILY | ARM repeat | 247 | 482 | IPR016024 | - | |
Seca6g03429 | 828 | MobiDBLite | consensus disorder prediction | 23 | 39 | - | - | |
Seca6g03429 | 828 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 83 | 826 | IPR045208 | GO:0003743 | |
Seca6g03429 | 828 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 657 | 818 | - | - | |
Seca6g03429 | 828 | SUPERFAMILY | ARM repeat | 660 | 809 | IPR016024 | - | |
Seca6g03429 | 828 | MobiDBLite | consensus disorder prediction | 552 | 595 | - | - | |
Seca6g03429 | 828 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 244 | 480 | - | - | |
Seca6g03429 | 828 | SMART | if4_15 | 253 | 479 | IPR003890 | GO:0003723|GO:0005515 | |
Seca6g03429 | 828 | Pfam | MIF4G domain | 253 | 479 | IPR003890 | GO:0003723|GO:0005515 | |
Seca6g03429 | 828 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g03429 | Seca-Chr6 | 101464244 | 101470862 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g03429 | 1 | 826 | Eukaryotic Initiation Factors Gene Family | AT5G57870 | 63.658 | 0.0 | 984 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g03429 | K03260 | - | gmx:100800438 | 1213.36 |