Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03393 ATGGCGTTGTTGCTAATCTCACGAATTCGCAGTGGAAACAGGGCACCCTATCCACCAGGACCAAAAGGTCTACCCATCATAGGCAACATTAACATGTTAGACCACCTCACACACCAAGCTTTAGCCAAGCTAGCAAACCAATACGGCGGCGTTTTGCACTTCCGCATAGGGTTCCTCCACATGGTTGCTATTTCCAATTCAGAAGCAGCACGCCAAGCGCTCCAACAACAGGACATCATCTTCTCCAATCGTCCTGCCACTGTAGCTATCAAGTACCTCACCTATAACCGTTCTGACATGGCCTTTGCTCACTATGGCCCTTACTGGCGCCAGATGCGCAAGCTCAGCCGTCGTGGCGCTCGAGGGAAGACCAACAAGAGTTCATTGCAATCATGCAGGAGTTTTCTAAGTTTTCTCACCAACAAGGTTGATGAGTTGCTTGCTTTTTGCGACGGTGAGGCTGGGCTTAATAGTGAATCAAACAACTCCGTCAAACTCACCAAGGATAACATCAAAGCGATCATGATGGATTTGATGTTTGGAGGGTCAAAGACGGTGGCATCAGCAATAGAGTGGGCAATGGTGGAGTTGATGAGAAGCCCAGAAGAGCTAAAACGCGTGCAACGAGAACTCGCCACTGTGGTGGGCCTAGACCGTTGTGTGGAGGAGTCAGACATCAACAAACTTGTCTATTTGAAATGTGTCATCAAGGAGATACTACGTCTCCACCCACCAGTCCCTATGCCTCGCCATGAAACGGCAGAGGACACGGTGGTGGCTGGTTACTTCATCCCAAAGGGCTCATACGTGATGTTTAATGTGTGGGCCATTGGGAGGGACAAGGAATCATGGGAGGACCCAGAAACATTCAAGCCCACACGATTTCTTGACCCAAGTGCACCTGATTTCAAAGGGACAGACTTTGAGTTCATTCCGTTTGGGTCTGGTCGAAGGTCCTGCCCTGGTATGCAATTAGGCCTGTATGGGATGGATATGACGCTAGCCCACTTACTTCATTGTTTCACGTGGGAGTTACCAAATGGGATGAAACCTTGTGAGGTGGATACGAGTGACGTGTTTGGACTTGCCGCCCCGAGGGCAAGACGACTCATCGCCATTCCCTCTAAGCGTGTGATTTGCCCTCTCTAA 1149 0.4987 MALLLISRIRSGNRAPYPPGPKGLPIIGNINMLDHLTHQALAKLANQYGGVLHFRIGFLHMVAISNSEAARQALQQQDIIFSNRPATVAIKYLTYNRSDMAFAHYGPYWRQMRKLSRRGARGKTNKSSLQSCRSFLSFLTNKVDELLAFCDGEAGLNSESNNSVKLTKDNIKAIMMDLMFGGSKTVASAIEWAMVELMRSPEELKRVQRELATVVGLDRCVEESDINKLVYLKCVIKEILRLHPPVPMPRHETAEDTVVAGYFIPKGSYVMFNVWAIGRDKESWEDPETFKPTRFLDPSAPDFKGTDFEFIPFGSGRRSCPGMQLGLYGMDMTLAHLLHCFTWELPNGMKPCEVDTSDVFGLAAPRARRLIAIPSKRVICPL. 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03393 382 Gene3D Cytochrome P450 156 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PANTHER CYTOCHROME P450 84A1-RELATED 131 382 - -
Seca6g03393 382 FunFam Predicted protein 179 372 - -
Seca6g03393 382 Pfam Cytochrome P450 140 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 Pfam Cytochrome P450 18 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 SUPERFAMILY Cytochrome P450 18 365 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 313 322 IPR017972 GO:0005506|GO:0016705
Seca6g03393 382 Gene3D Cytochrome P450 4 155 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PRINTS P450 superfamily signature 234 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PRINTS P450 superfamily signature 181 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PRINTS P450 superfamily signature 311 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PRINTS E-class P450 group IV signature 278 296 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PRINTS E-class P450 group IV signature 229 245 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PRINTS E-class P450 group IV signature 172 198 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PRINTS E-class P450 group IV signature 304 320 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PRINTS E-class P450 group IV signature 262 276 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03393 382 PRINTS E-class P450 group IV signature 320 338 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03393 Seca-Chr6 101023005 101026532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03393 146 382 Monolignol Biosynthesis Gene Families AT4G36220 69.167 1.99e-123 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03393 K09755 - gmx:100807448 372.859