Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03392 ATGGTGACCATCAAAGCATCTTACAATGTCATTCCTAAAGAGCCAACTCCCATTGTTCGTTTAGAGCTATCCGATAATGACCAAATGTTGCGTCGAAGTCATGTTTCCACTATCTATGTTTACAACACAAATCCCAACCTTGATGCCATTGAGAGAATGAGTGAGTCCCTTAGTAACATTTTAGTCAATTACTATCCAATAGCTGGCCGATTGAGTTGGATAGAAGGTGGTCGATTGGAATTGAATTGTAATGCAAAAGGAGCATTATTGTTGGAAGCTGAATCCACAAAAACATTAGATGAATATGGAGATTTTTCACCCAATGACTCCATCAAGGAACTCACTCCTTTAATTGATTATAGTCAACCACTAGAGGAGATTCCATTGTTGGTGGTACAACTCACAAGATTCCATGGTGGCAAAGGTGTTGCAATTGGAGTTGCTATCTCACATCCTTTGGGTGATGGGTTTGCTTCTACTCGCTTCATTAACACATGGGCCAAGGTGTCTCGTGGAGATCTATTAAATGAGGAAGAAAAGTTTCCTTTTTTGGATCGATCTATAATCAAATCTCCACACCCACCATTGGCACCACGATTTGAGCACCCTGAATTTAAAGGCCTACCTCTCAAGCTAGGTAGCATTGATAGCAAGGAAGAGCAAAAGAAGAAGCTTATTGCAATAACATTGAAACTCACTTCAAACCAAGTGGAGAAGTTGAGGAATAAGGCCAATGAAGAAAAAGGGTCACTATCATCAAGACCTTATAGTAGATTTGAATCTATTGCGGCACATATATGGAGATGTGCATGTAAGGCTCGTGAACTTGATGAGAATCAACCAACTCGAGCTCGATTCAATGTTGATGTTCGCAATAGGTTGAATCCACCTTTACCTCCAAATTATTTTGGGAATGCTGTGGCTCCAACCGTGTCACCATTGTGTTACGTTGGAGAAATCTTGTCAAATCCGTTGAGTTTTGCTGCCCAAATGATAAGGGAAGGTTCTGAGCTAATTACAAATGACTACATAAGGTCACAACAAGATTTTGTTAGGGGGCATGAGGAAATGGATGGGATAAGACCTTCTTTTAAGCTTCGTGGTGAAGATAAGAATAATGCCCCGTTTTATGGGAATCCTAATATTAACTTTGTGATATTGATGAGGATGCCATGGGGTGAAGTTGATTTTGGATGGGGAAAACCAATGTATTTTGGTCCATCACTTGTGTGTCCAACTGATAAGGCAATTCTTATTGACTCAGATGGGGATGGTTCTGTCATCATCTCTATGAGTTTTCAAGAAGTGCATATGGAGCTTTTTACTAAGTTCTTTTGGCAGGATATTTAA 1350 0.3993 MVTIKASYNVIPKEPTPIVRLELSDNDQMLRRSHVSTIYVYNTNPNLDAIERMSESLSNILVNYYPIAGRLSWIEGGRLELNCNAKGALLLEAESTKTLDEYGDFSPNDSIKELTPLIDYSQPLEEIPLLVVQLTRFHGGKGVAIGVAISHPLGDGFASTRFINTWAKVSRGDLLNEEEKFPFLDRSIIKSPHPPLAPRFEHPEFKGLPLKLGSIDSKEEQKKKLIAITLKLTSNQVEKLRNKANEEKGSLSSRPYSRFESIAAHIWRCACKARELDENQPTRARFNVDVRNRLNPPLPPNYFGNAVAPTVSPLCYVGEILSNPLSFAAQMIREGSELITNDYIRSQQDFVRGHEEMDGIRPSFKLRGEDKNNAPFYGNPNINFVILMRMPWGEVDFGWGKPMYFGPSLVCPTDKAILIDSDGDGSVIISMSFQEVHMELFTKFFWQDI. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03392 449 Gene3D - 1 207 IPR023213 -
Seca6g03392 449 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 441 - -
Seca6g03392 449 Pfam Transferase family 1 443 - -
Seca6g03392 449 Coils Coil 230 250 - -
Seca6g03392 449 Gene3D - 213 447 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03392 Seca-Chr6 101019012 101020361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03392 2 447 Monolignol Biosynthesis Gene Families AT5G48930 34.076 5.71e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03392 K13065 - gmx:100787038 526.554