Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03361 ATGGGAACTAGAGCCGTTGAAGGCATAACTTTTGATATTTCTAAAGCTAGTGATCTGCATTTGAGCTCTCATTCCCTTGAAAGGATGACTTGCTTAAGATATCTTGAAGTCTATGGGATCTCTGACAAATGTAATATTTACTTTCCTGATGGCCTTGGGTCCTTGTCTGATAAATTTTGCCTTGAGTCTTTGCCATCAACCTTTCGTGCAGAAAAGCTTGTAGAGATTCACATGCCTTCTAGCAAACTTAAAATGCTTTGGAATGGAGTTCAGAATCTGGTGAATTTGAAGAAAATTAACCTTGGCTTCTCCAAACACCTGATTGAGGTCCCGGACTTATCTAGGGCCGCAAATCTTGAAACGGTAGATCTTCGTTCTTGTGAAAGCTTGAACCAACTCTGTCCATCAGTTTTAAAACGGCTAGATTTGTCATGCTGCTACCACTTAAAAAAAATCCCTGACAGCATAAAAGACCATCATGCAATACTGAGACAGCTTGTGTTAGATGATTGCAGGGATCTTGTGTATCTACCAGATCAGCTTTCACCATACCTGCAACATTTGAGCGCCTTTAATTGCATTTCTCTAGAGAAAGACTTCACTCAACATCCCGTGCCTGAACACGTGAAGAAGCTAGCAATGAGTTTGTTTTCTTCTTCCCAGGATCCAGACGGGTTTAGTTTCATTACAGGAGAGGCTTCAATAACTCTTGCAAATATGACTTGTGCGTCAGTATGTTGGTATGCTTCCATCGACAAACTTCTTAATATTCAAGAAAGTGAAGATGATGATCAATTTTACAACATATCATTTGAATTCAAACTTGATGACAAAGATGCACTATGGTCAACGGAAGGGATAAAGGGATGTGGGGTCTACCCAGTATATGCCTCGCAAGTGAGGTGGAAGCTTTCTGATAGATATAGAGAGAAGATACATGGATCAAAATCCAATGCTCAAATCTCTGATACGCATTTGAAAATGGACATTGATGAGTTACAGCCCATAGTAATTGAATGCTCTAATAATGACAACGAAGATGACCAGGATCAACTTCTTACAATTTCTTCCCGCGAAGAAGAGGAGGACTTGAGTGAAAAGCCTTCTTCTGACTGCTTCATCGGGACACTCAATTCTTCTAGAAGGGGTCTTATAAATAGGGAGGGGGAGTATATTACACTAACATTGCGGTGGAACAACTCCTTGAGCAGGTCCCTTGCTGAAGCGCTTATGGACAATACTGGTGGGCAGTTGAGCACTGACCCTAACTTGTTATAA 1278 0.4085 MGTRAVEGITFDISKASDLHLSSHSLERMTCLRYLEVYGISDKCNIYFPDGLGSLSDKFCLESLPSTFRAEKLVEIHMPSSKLKMLWNGVQNLVNLKKINLGFSKHLIEVPDLSRAANLETVDLRSCESLNQLCPSVLKRLDLSCCYHLKKIPDSIKDHHAILRQLVLDDCRDLVYLPDQLSPYLQHLSAFNCISLEKDFTQHPVPEHVKKLAMSLFSSSQDPDGFSFITGEASITLANMTCASVCWYASIDKLLNIQESEDDDQFYNISFEFKLDDKDALWSTEGIKGCGVYPVYASQVRWKLSDRYREKIHGSKSNAQISDTHLKMDIDELQPIVIECSNNDNEDDQDQLLTISSREEEEDLSEKPSSDCFIGTLNSSRRGLINREGEYITLTLRWNNSLSRSLAEALMDNTGGQLSTDPNLL. 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03361 425 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 197 IPR044974 GO:0006952
Seca6g03361 425 Pfam Leucine Rich Repeat 72 91 IPR011713 -
Seca6g03361 425 Gene3D Ribonuclease Inhibitor 9 214 IPR032675 -
Seca6g03361 425 SUPERFAMILY L domain-like 11 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03361 Seca-Chr6 100667274 100669297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03361 2 214 WRKY Transcription Factor Family AT4G12020 33.475 1.60e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03361 - - cam:101499873 169.859