Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03348 ATGGATTTCTCAAAGAGCCTTCTTCAACCCAGGTCATCATCTTCCTCTTCCATTCCTCCACACCGCACCCAACTCCACCCTCGCATGATCTCTCTCTACTCCCCAATTCCCAATCCCAATCCCAATCCCAATCCCAAACCCCACTCCAAATCCTTCCTCTTTCTCTTCCTCTCCCTTCTCCTCCTCACCTCCCCTTTCCTCTTCTACCTCTTCTCCACCGCATTCCAAATCCACTCCTCCCCAAACTTCTCTTCCCCTAACCCCTCCTTCTTCGCCCTCCTCCTCCACGCTTCCCCTTCCTCTTCCCGCATCTCCATCTTCCACTTCCTCGGCCGCGGCCCCCTCCCCTTCCTCGCCGAGACCACTTCCGCCGAGGCTAAACCCGGTTTCGCGGTCTTCGGGTCTGACCCGGATGCGGTTCGGGACTCCATTGTGGAACTGGTGGAGTTTGCGAAAGGGAGGGTGCCCAGGAAGGAGTGGGGGAACACGAGGGTGCAGCTTATGGCCGCTGAGGAGTTAGAGGGTTTGGGTGCCGAGACAAGGGAGAAGGTGTTGGAGTGTTGCAGACAGGTTCTGAGGTTGTCCGGGTTCTTGTTCAAAGATGAATGGGCACGCGTTATTCCAGGGGAAGAACAAGGCATCTCTTCTTGGGTTGCTGTAAATTATGCTCTTGGAAACTTGGGACGTGAGCCTCAAGAAACAACTGGAATAGTTGAACTTGGTGGGGCTTCTTTGCAGGTTGCATCTGCTTTGCTTAATGCAAAGTTAGTTCAGTCTTCGCGGACTATAAGATTGTCTGGTGTTACTTACAATCTTTTCACTAGGAGTTGGCCACACTTCGGTCAGGATATGGCATGGAAATCATTAGAGGAACAGCTGAAACTTAGAGAGTTGAAGCTTTCTTCAAAAGTTAGCGAAAGAATTTCACTTAATCCTTGCATTCCTAGAGGGTATGAGTATCCTCGGATCTCTAATGCAAGTTATGTAAAACACCCAATCTTCCAACCAGTTGGAAATTTCTCGACATGCAGATCTGAAGCTCTGTCATTGTTAAAAAGAACAGAAGATAGATGCTTGCATCCACCTTGTAAAATCACTTCATCCTTTTATGAGTTATCAGCTGGACAAATTTCTTCAAGAAACTTCTTGTATACTTCTGAGATTCTTGGGATGGCTCCTGGGGCATCTTTGTTTGAACTAGAGGCAACAGGCCGACATTACTGTGAAGATCATTGGGATGCTCTTAAAGATCAACATAATGAAATTGATTATCTGGATTTATTGAAATATTGTTTCTCTTCTGCATATATGGTGGCATTATTACATGATGTTATTGGGATCCCTATGGAAGAGAAAAGGGTTGGATTTGGGAACCAGAAGATGAACATTAGTCATGTTGACTGGACACTTGGATCTTTCTTAATTGAAACAATGGCAGAACCCCTTGAATTGGTGGAGCATATAGATGCAGGAATGATTGTTGGGAATGAATCAGTCACATATTTTTCATTATTTGCATTTCTTTTCTTAATTGTACTTGCTGCATTCTTTGTACTGCAATGTAGAAAGCCTCCATTGAAGACTGTATATGACCTTGAGAAAGGACACTATATTGTTACTCGTGTTCCTAGGTGA 1635 0.4569 MDFSKSLLQPRSSSSSSIPPHRTQLHPRMISLYSPIPNPNPNPNPKPHSKSFLFLFLSLLLLTSPFLFYLFSTAFQIHSSPNFSSPNPSFFALLLHASPSSSRISIFHFLGRGPLPFLAETTSAEAKPGFAVFGSDPDAVRDSIVELVEFAKGRVPRKEWGNTRVQLMAAEELEGLGAETREKVLECCRQVLRLSGFLFKDEWARVIPGEEQGISSWVAVNYALGNLGREPQETTGIVELGGASLQVASALLNAKLVQSSRTIRLSGVTYNLFTRSWPHFGQDMAWKSLEEQLKLRELKLSSKVSERISLNPCIPRGYEYPRISNASYVKHPIFQPVGNFSTCRSEALSLLKRTEDRCLHPPCKITSSFYELSAGQISSRNFLYTSEILGMAPGASLFELEATGRHYCEDHWDALKDQHNEIDYLDLLKYCFSSAYMVALLHDVIGIPMEEKRVGFGNQKMNISHVDWTLGSFLIETMAEPLELVEHIDAGMIVGNESVTYFSLFAFLFLIVLAAFFVLQCRKPPLKTVYDLEKGHYIVTRVPR. 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03348 544 Gene3D - 92 471 - -
Seca6g03348 544 MobiDBLite consensus disorder prediction 1 22 - -
Seca6g03348 544 Gene3D Exopolyphosphatase. Domain 2 208 464 - -
Seca6g03348 544 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 57 480 IPR000407 GO:0016787
Seca6g03348 544 Pfam GDA1/CD39 (nucleoside phosphatase) family 90 479 IPR000407 GO:0016787
Seca6g03348 544 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03348 Seca-Chr6 100558597 100567749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03348 84 481 Calmodulin-binding Proteins AT3G04080 25.995 2.68e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03348 K01510 - gmx:100806446 727.243