Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03330 ATGGAAGATTTCATCTTCAAAAGCTTGACAATCCCTTTTACTCTGCTAATTCTCCATGGTATAATAAAACTTGTCCTCAATTTCTGGTGGAGACCCAAAAGAATAGAGAATGTACTTAGGCAGCAAGGGGTAAGAGGTACTAACTACAAGTTTTTGAATGGTGACATGCCAGAGATGATAAAGACTAACCAAGAGGCATCATCTAAACCTATGTCCCTCAACCACCAAATCATTCCACGAGTCATCCCATTTCTTCACAAAATGGTTCAGCAATTTGGAAAAATTTCACTTTTTTGGTTTGGAAGAACTCCATGTCTGCTAATAGAGGATGCAGAGCTTGTGAGGTTCATACCAACTAGAAAGAACAAAAGGAGATACCAAATATACAATCAAATTAATGCTGTATTGAGAGAAATGATCAAGAGGAAAGAGCATGCAATGAAAATAGGTGCCTTGGAACATCATGATTTATTAAGCCTTCTATTGCAGTACAAAGAAGAAAGTAATGATTCTCTAACAATTGATGATGTGATTGAGGAATGCAAGTTGTTATACTCTGCTGGCCAAGAGACCACAACTAACTTGCTTACATGGACCATGATTGTTTTGTCTATGCATCCAAATTGGCAGGACAAGGCAAGAGCAGAAGTATTGGAAATTTGTGGCAAAAGAACCCCTGATCTTGAAGTCATAAATCGCCTTAAAGTAGTGTCAATGGTACTTCATGAAGTCGTAAGATTATACCCACCAGTGTCATATATTCAGAGGTATTGGGACAATCCAGAAGAGTTCAATCCAAAGAGGTTCTCAGAAGGGGTTTCCAAAGCTTCCCATGATCAAGTTGCTTTCTATCCATTTAGTTGGGGTCCCAGAATCTGTGTTGGCCAAAACTTGGCCATCATAGAAGCAAAAATGGCTCTTGCTATGATTCTTCAACATTTCTCATTTCAACTTTCACCCTCTTATGCTCATGCTCCTAGTAATAATGTCACTCTTAAGCCACAACATGGAGCTCCAATTATTATCCACCTTTGCAGTCACAACTGCATCCATTCTGAGCTCCACATCGCTCAAATATTTATAACAAATAATATTTATAAGAACTGTGAGAAAGTTGACAATTCGCTGAGTTGGGTAGCGCCAGCTTGTGACCCAAGTGGGGGCACCAAGATGATGGAACATAGCTTCGGCTCTATTGGGTTGGGCTGGTTGGTGCAACTGGTTGGTCTGTCCGCTCCAAGTTTAGAGTTTGGGCCATGGGGATTGATGAGTGAAGGCCCAGGCCTCATGGTTCCTAGACAGGAGGGCACAGCGTGA 1317 0.4093 MEDFIFKSLTIPFTLLILHGIIKLVLNFWWRPKRIENVLRQQGVRGTNYKFLNGDMPEMIKTNQEASSKPMSLNHQIIPRVIPFLHKMVQQFGKISLFWFGRTPCLLIEDAELVRFIPTRKNKRRYQIYNQINAVLREMIKRKEHAMKIGALEHHDLLSLLLQYKEESNDSLTIDDVIEECKLLYSAGQETTTNLLTWTMIVLSMHPNWQDKARAEVLEICGKRTPDLEVINRLKVVSMVLHEVVRLYPPVSYIQRYWDNPEEFNPKRFSEGVSKASHDQVAFYPFSWGPRICVGQNLAIIEAKMALAMILQHFSFQLSPSYAHAPSNNVTLKPQHGAPIIIHLCSHNCIHSELHIAQIFITNNIYKNCEKVDNSLSWVAPACDPSGGTKMMEHSFGSIGLGWLVQLVGLSAPSLEFGPWGLMSEGPGLMVPRQEGTA. 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03330 438 Gene3D Cytochrome P450 64 255 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03330 438 Gene3D Cytochrome P450 256 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03330 438 PRINTS P450 superfamily signature 187 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03330 438 PRINTS P450 superfamily signature 239 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03330 438 PRINTS P450 superfamily signature 293 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03330 438 PRINTS P450 superfamily signature 284 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03330 438 SUPERFAMILY Cytochrome P450 75 342 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03330 438 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 286 295 IPR017972 GO:0005506|GO:0016705
Seca6g03330 438 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 115 - -
Seca6g03330 438 Pfam Cytochrome P450 87 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03330 438 Pfam Cytochrome P450 256 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03330 Seca-Chr6 100286193 100289876 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03330 115 343 Cytochrome P450 AT3G14610 43.182 2.08e-75 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03330 - - lja:Lj0g3v0208029.1 395.586