Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03310 ATGGAGGTTAAAAGAAAAATAATCGTGTGTTTAATGATGTCCATCACAATAGGGTATTATAGAATTGAAGGGAGAGACCCTGTCTTGCATAAGGTTGGAGGAGGAAGGTATACTTGGGAACCTAAAGTTAACTTCACAAAGTGGGCAAGTCATGAGCACTTCTACAGGGGTGATTGGCTATATTTTGGTTTTGACAAACAAATCTATAATGTTCTAGAGGTGAATAAAACAAATTATGAGAAATGTATTGATAACGACTTCATAAACAACATCACAAGAGGAGGGAGAGATGTTTTCCAACTCATAGAGGCAAGACCATATTATTTTATCTGTGGTAGAGGCTTTTGCTTTCAAGGGATGAGGTTTACAATAAACGTAGAACAGCAGCCCGTAGTAGCACTATCTCCAACAATGCCTAACAAAGCATTTTCATCAAGTCATACCAAACTACTTGTGGTTTTGGTCACGGTTTTGTTATGGACGCTCATGTAA 492 0.378 MEVKRKIIVCLMMSITIGYYRIEGRDPVLHKVGGGRYTWEPKVNFTKWASHEHFYRGDWLYFGFDKQIYNVLEVNKTNYEKCIDNDFINNITRGGRDVFQLIEARPYYFICGRGFCFQGMRFTINVEQQPVVALSPTMPNKAFSSSHTKLLVVLVTVLLWTLM. 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03310 163 FunFam Lamin-like protein 26 129 - -
Seca6g03310 163 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Seca6g03310 163 SUPERFAMILY Cupredoxins 30 126 IPR008972 -
Seca6g03310 163 Gene3D - 28 131 IPR008972 -
Seca6g03310 163 PANTHER BLUE COPPER PROTEIN 29 135 IPR039391 GO:0009055
Seca6g03310 163 Pfam Plastocyanin-like domain 39 120 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03310 Seca-Chr6 99989551 99990141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03310 29 151 Phytocyanin Superfamily AT2G27035 59.350 3.33e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03310 - - gmx:100789719 244.202