Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca6g03306 | ATGGGGATTCAGACAATGGGTTCTCAAGGTAATGGGCAACAGTCTCATTTACAACATTCTCCATTGTCTAGGCAAAGCTCTTGGTATAATCTCACCCTTGATGAGGTTAAGAGTCAATTAGGAGACATGGGGAAGCCATTAGGGAGCATGAACCTTGATGAGCTTCTTCAGAATGTGTGGACTGCTGAAGCAAATAAGCCTGTGCTAGGCATGGACAATGATGAAAACATGTCATCATCATCTTCCCTTCAACGCCAGGCCAGTCTCACATTGGCCCGTGCTTTGAGTGGGAAGACAGTTGATGATGTGTGGAGAGAGATTCAACAAGGTCAGAAGAAAAGGTATGGAGAGGGTGTGAAGAGCCATCAGGATAGAGAAATGAGTCTTGGTGAAACAACCTTAGAGGATTTCTTGGTGCAGGCAGGGCTTTTTGCTGAAGCTTCTAACAGTCCAGCTGTGGGGTATGATACAATGGAGTCCCCCACTCCCCAAAGTTTTCAACACAAAACAGGATTTACATCCTCCCCTTCAATTGGCAGCTTGTCGGACACAAGACCGGGCCGGAAAAGGGACTGTCCTGATGCATATGAGAAAACTCTGGAGAGGAGGCTGAAGAGGAAAATCAAGAATAGGGAATCAGCTGCTCGATCACGGGCCCGAAAACAGGTTGCTTACCATAATGAACTGGTTGGCAAGGTTTCCCGTCTAGAAGAAGAAAATATAAAGCTCAAGAAAGAGAAGGAATTTGAACAGAGGTTACCATTTGATCCATTGTCTGAACCAAAATATCAGCTTCGAAGAATAAATTCTGCCTCTTTCTGA | 822 | 0.4513 | MGIQTMGSQGNGQQSHLQHSPLSRQSSWYNLTLDEVKSQLGDMGKPLGSMNLDELLQNVWTAEANKPVLGMDNDENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEGVKSHQDREMSLGETTLEDFLVQAGLFAEASNSPAVGYDTMESPTPQSFQHKTGFTSSPSIGSLSDTRPGRKRDCPDAYEKTLERRLKRKIKNRESAARSRARKQVAYHNELVGKVSRLEEENIKLKKEKEFEQRLPFDPLSEPKYQLRRINSASF. | 274 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca6g03306 | 273 | Pfam | bZIP transcription factor | 202 | 247 | IPR004827 | GO:0003700|GO:0006355 | |
Seca6g03306 | 273 | SUPERFAMILY | Leucine zipper domain | 202 | 251 | IPR046347 | GO:0003700|GO:0006355 | |
Seca6g03306 | 273 | SMART | brlzneu | 198 | 271 | IPR004827 | GO:0003700|GO:0006355 | |
Seca6g03306 | 273 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 205 | 220 | IPR004827 | GO:0003700|GO:0006355 | |
Seca6g03306 | 273 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 22 | 270 | IPR043452 | GO:0003700|GO:0045893 | |
Seca6g03306 | 273 | MobiDBLite | consensus disorder prediction | 160 | 193 | - | - | |
Seca6g03306 | 273 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 200 | 253 | - | - | |
Seca6g03306 | 273 | Coils | Coil | 226 | 253 | - | - | |
Seca6g03306 | 273 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Seca6g03306 | 273 | Gene3D | - | 200 | 253 | - | - | |
Seca6g03306 | 273 | MobiDBLite | consensus disorder prediction | 160 | 182 | - | - | |
Seca6g03306 | 273 | CDD | bZIP_plant_BZIP46 | 202 | 252 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca6g03306 | Seca-Chr6 | 99948309 | 99954589 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca6g03306 | 22 | 273 | bZIP Transcription Factor Family | AT3G56850 | 47.735 | 1.58e-66 | 207 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Seca6g03306 | bZIP_1 | 5.6e-09 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca6g03306 | K14432 | - | gmx:100798549 | 426.017 |