Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03279 ATGGCTCTAATGTTTCTTTTCAAAGAAATCTTCGTATCCATTCTAATCTTTTTCATCACCCGTTTCTCCTTCCGTTCACTCCTAAAAAGCCACCGGAAACTCCCACCAGGACCAAAAGGGTGGCCAGTTTTGGGCGCAATCCCATTGATGGGAAGCATGCCACATGTGACCCTCTCAAAAATGGCCAAAAAATACGGACCCGTAATGTACCTCAAAATGGGCACTAACAACATGGTTGTGGCCTCTACACCTTCAGCAGCCAAAGCATTTCTGAAAACACTTGACCAAAACTTCTCCAATAGGCCTCCAAACGCAGGTGCAACTCACTTAGCTTATGACTCACAAGACTTGGTGTTTGCTGATTATGGTTCAAGGTGGAAGTTGCTTAGGAAACTGAGCAACTTGCACATGCTTGGTGGAAAGGCTCTTGATGATTGGGGACATGTACGGGAGGTAGAGATGGGTTACATGCTTAGTGCAATGTGTGATTGTGGTAAGAGAGGTGAGGCTGTTGTGGTGCCTGAGATGTTGACATATGCTATGGCTAATATGGTGGGTCAAGTCATATTAAGTCGTCGTGTGTTTGAGACTAAAGGTGAGGAGTCTAATGAGTTTAAGGATATGGTTGTTGAGTTGATGACGGTTGCGGGGTACTTTAATATTGGGGATTTTATTCCGGTTCTTGGGTGGTTGGATTTGCAAGGTATAGAGCGTGGGATGAAGAGCTTGCATAAGAAGTTTGATGCGTTGTTGACGAAGATGATTGAGGAACATTCGGGGTCTAGTTATAAGAGAAAGGATAAGCCTGATTTCTTAGATGTTGTCATGGCTTACCAAAATGATAACTCCGATGGAGAGAAATTGTCGCTTACTAACATCAAGGCACTACTCTTGAATCTATTTACAGCAGGCACTGACACATCCTCAAGTATCATAGAGTGGGCACTAGCAGAGATGTTGAAAAACCCATCCATTATGAGAAGAGTTCATGAGGAAATGGACCAAGTCATAGGAAAAGATCGACGCCTCCAAGAATCAGACTTAGCGAAGCTTCCATACTTAACAGCGGTGTGCAAAGAGACATACAGAAAGCACCCATCAACGCCACTAAACTTGCCTCGAGTGTCCACAGAAGCATGTGTGGTGAATGGGTATTACATCCCCAAAAACACAAGGCTGAGTGTAAACATATGGGCCATAGGTCGAGACCCTGATGTGTGGGAAAGCCCATTGGAGTTTAATCCAGATAGGTTTCTCACTGGCCGGAATGCTAAAATTGATCCACGTGGCAATGATTTTGAGCTAATTCCATTTGGTGCTGGGAGAAGGATTTGTGCTGGGACTAGGATGGGGATTGTGCTTGTTCAGTACATTTTGGGCACTTTGGTGCATTCATTTAATTGGAAGCTACCAAATGGTGTTGGGGAGTTGGATATGGAAGAGGCCTTTGGGCTTGCCTTGCAGAAAAAGGTCCCTCTTGCTGTTATGGTTACTCCTAGGTTGGCCCCAAGTGCTTACATTTCTTAG 1527 0.446 MALMFLFKEIFVSILIFFITRFSFRSLLKSHRKLPPGPKGWPVLGAIPLMGSMPHVTLSKMAKKYGPVMYLKMGTNNMVVASTPSAAKAFLKTLDQNFSNRPPNAGATHLAYDSQDLVFADYGSRWKLLRKLSNLHMLGGKALDDWGHVREVEMGYMLSAMCDCGKRGEAVVVPEMLTYAMANMVGQVILSRRVFETKGEESNEFKDMVVELMTVAGYFNIGDFIPVLGWLDLQGIERGMKSLHKKFDALLTKMIEEHSGSSYKRKDKPDFLDVVMAYQNDNSDGEKLSLTNIKALLLNLFTAGTDTSSSIIEWALAEMLKNPSIMRRVHEEMDQVIGKDRRLQESDLAKLPYLTAVCKETYRKHPSTPLNLPRVSTEACVVNGYYIPKNTRLSVNIWAIGRDPDVWESPLEFNPDRFLTGRNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVQYILGTLVHSFNWKLPNGVGELDMEEAFGLALQKKVPLAVMVTPRLAPSAYIS. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03279 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 CDD CYP75 66 500 - -
Seca6g03279 508 PANTHER CYTOCHROME P450 98A9 11 504 - -
Seca6g03279 508 Gene3D Cytochrome P450 26 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Seca6g03279 508 SUPERFAMILY Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca6g03279 508 FunFam Flavonoid 3',5'-hydroxylase 2 26 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03279 Seca-Chr6 99482951 99485974 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03279 6 506 Cytochrome P450 AT5G07990 48.622 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03279 K13083 - gmx:547705 865.914