Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03273 ATGTTTCTTCTGTTAGGACACTTGGCGGGAAACTTCAACCAACCGTTTTTGGCGGGAGCGGTTATTTTGGGGATTGCGGTTCCAGAAGGGCCTCCGTTAGGGTCTGAGTTGGTTTACCGTCTTGAACTGTTTTCCTCATGGTTTCTGGTGCCAATTTTTGTCACCAGTTGCACCATGAAGGTGGATCTCACAAACTGTGAGCCTCCTAAGTTGGTTGTGGTTATAATCTGCTTCATTGCTATGGTGCATTTGATTAAGATTCTGCAGTGTGTGGGAATTTGCCGATTATGCAACATGCCAACCAGAGACGGTTTCTGCCTTGCTCTCATTTTGAGTTGCAAAGGTGTCGTTGAGATCTGCTCCTTCACCCTCGTTTACGATGGAATGAGACAAACTCCGCAAGCAATTGGTGTGATGGTTGTGTCGGTGTTGATAATGGGAACGGTTTCGCGGATTGGTGTGAAGGCTTTGTATGATCCTTCAAGGAAATACGCGGGGTATCAGAAAAGGAACATTATGAGTTTGAAAAATACCTCTGAGCTTCGAGTTGTTGCATGCGTCCACAAGCTGAACCACATGATTCACATCAAGGATTTCCTTCAGGTTTGTTCTCCTGCGCCGGATAATACACTAGTTGTGGATGTGGTGCATCTCTTGGAGCTAATTGGAAGGACCACTCCTGTTTTCATTGCGCATCGCCTTCAGCAAAAGTTAGGGTCCACCAATGACTACTCTGGAGAACTCATTGTGACGTTTGACCTTTTTGAGCGTGATTATGCAGGTTCTGCAACGGCTAATACCTACACAGCCATATCACCAGTGTCACTAATGCATGAAGATGTTTGTCATCTTGCGTTGGACAAAAATGCAGCTATTATAATCCTTCCATTTCATATAAGATGGTCAGAGGATGGTTCTATTGAGTCAGTGGACAACAAAATTAGGTCACTTAATTCTAAGGTTTTGGAAAGGGCGCCTTGTTCAATTGGGATTCTAGTTAATCGTGGCTCTTACTCTGCTCATCATCCAAGAAGTTATCAAGTAGCCGTGATTTTCCTTGGTGGGCCAGATGATAGGGAAGCTTTGTGCCTGGCTAAAAGGTTTGCCAATAATTTAGATAATAGGTTGGTTGTGTATCGCTTGCTTGCACATAATCATGATTCAACAAATTGGGAGCATATGATCGATGATGAGGAGCTAAGGGAGGTGCGTGGAGCTTATGTTAAACTTGAGAATGTGACATATGAAGAAAAGACTATAGATGATGCATCACAGACGACGACTTTCCTTAGAGATATAGCAAATAAGTTTGATTTTATTGTAGTTGGGAGACGCAATGGGCTCGAATCTCCTCAGACTAATGGGTTGGAAAATTGGACTGAATATACAGAATTGGGGGTGATTGGTGATTTGCTTGCTTCACCAGATATGGAGACTAAAGCTTCTATTTTCGTTGTGCAACAACAACAAACGACGTAG 1479 0.4334 MFLLLGHLAGNFNQPFLAGAVILGIAVPEGPPLGSELVYRLELFSSWFLVPIFVTSCTMKVDLTNCEPPKLVVVIICFIAMVHLIKILQCVGICRLCNMPTRDGFCLALILSCKGVVEICSFTLVYDGMRQTPQAIGVMVVSVLIMGTVSRIGVKALYDPSRKYAGYQKRNIMSLKNTSELRVVACVHKLNHMIHIKDFLQVCSPAPDNTLVVDVVHLLELIGRTTPVFIAHRLQQKLGSTNDYSGELIVTFDLFERDYAGSATANTYTAISPVSLMHEDVCHLALDKNAAIIILPFHIRWSEDGSIESVDNKIRSLNSKVLERAPCSIGILVNRGSYSAHHPRSYQVAVIFLGGPDDREALCLAKRFANNLDNRLVVYRLLAHNHDSTNWEHMIDDEELREVRGAYVKLENVTYEEKTIDDASQTTTFLRDIANKFDFIVVGRRNGLESPQTNGLENWTEYTELGVIGDLLASPDMETKASIFVVQQQQTT. 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03273 492 Gene3D - 1 165 IPR038770 -
Seca6g03273 492 PANTHER CATION/H + ANTIPORTER 3 491 - -
Seca6g03273 492 Pfam Sodium/hydrogen exchanger family 19 149 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03273 Seca-Chr6 99395163 99396723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03273 8 490 Antiporter Super Family AT5G22900 37.325 1.32e-115 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03273 K26731 - gmx:100797272 743.036