Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03261 ATGGTGAAGGTTTGGAAGGCATGGAGTAGTGTTTTGGTTACTGCAGTACTGCATTTGTTGCACATCACTTCTTCATCACATGATTCCAGTACCGTCAAGAATCTACCAGGTTTTGGAGATCTTCCTTTCACATTGAATACCGGATACATTGGTGTTGGTGAAAGAGAAGAGGTGCAGCTATTTTATTACTTTGTTGAATCTCAAAGGAGTCCCATGAATGATCCTTTACTACTTTGGCTGGTTGGAGGCCCTGGTTGCTCTGCCCATACTGCTTTCTTCTTTGGAAGTGGGCCATTAAGGTTCAATTATGATGATTTTAACGGGAGCCTACCAGAACTTCAATTGAATCCAAACACTTGGACAAAGTGGTTAGTGAATCATCCTAAATTTAGATCAAATCCACTTTACATTGGTGGTGGTTCATATTCAGGCAAGATCATTCCTCCCCTTGTTCAAAAAGTATATGAAGATTATAAAGTAGGACACTCACCAATCCGAAACATCCAGGGCTTTGTGCTTTCAAGTCCAAGACTTGATTTTCACATGGACAATAACTCAAAAGTTGAATTTGCTCACCAACGAACACTTATATCAGATGAGCTATACGAGTCAATTAAATCTAGTTGTAATGGTGATTATATCAATCGCGATCCAAACAATACAAATTGTACGTCAGATTATGAAGCCTTCTTTGAGGATGACGACTATGCGGTTGGTGAATTGTGGGCAAATGATCCACATGTTCGAAAGGCTCTACACGTTAGGGAGGGAACCAAAGGGCACTTCCAAAGATGCAATCGTAGTATGGCATATACAAAGAACGTTCATAGTGTTGTTGAATATCTTCGAAATCTCACCCACACAAATCTTCAATCTCTAATTTACTGTGGTGATCTAGACATGTCGATACCGTATCTTAGTTCACTTTCTATTGTCAAGTCAATGAATTTGAATTTGGATAAGACTTGGCATCCATGGTTCGTTGATGGTGAAGTCGCAGGATATACAGAGGAATACAAAAGGAGTGAGTATCACCTGACCTACACCATTGTTAAGGGAGGGTGTCATGTACCTCAAGAGAACAAGCCTAAAGAAGTGTATGAGATGATCGATAGATGGTTATCGTCTCATGATATATGA 1140 0.3982 MVKVWKAWSSVLVTAVLHLLHITSSSHDSSTVKNLPGFGDLPFTLNTGYIGVGEREEVQLFYYFVESQRSPMNDPLLLWLVGGPGCSAHTAFFFGSGPLRFNYDDFNGSLPELQLNPNTWTKWLVNHPKFRSNPLYIGGGSYSGKIIPPLVQKVYEDYKVGHSPIRNIQGFVLSSPRLDFHMDNNSKVEFAHQRTLISDELYESIKSSCNGDYINRDPNNTNCTSDYEAFFEDDDYAVGELWANDPHVRKALHVREGTKGHFQRCNRSMAYTKNVHSVVEYLRNLTHTNLQSLIYCGDLDMSIPYLSSLSIVKSMNLNLDKTWHPWFVDGEVAGYTEEYKRSEYHLTYTIVKGGCHVPQENKPKEVYEMIDRWLSSHDI. 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03261 379 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 122 IPR001563 GO:0004185|GO:0006508
Seca6g03261 379 SUPERFAMILY alpha/beta-Hydrolases 32 377 IPR029058 -
Seca6g03261 379 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 148 IPR001563 GO:0004185|GO:0006508
Seca6g03261 379 PRINTS Carboxypeptidase C serine protease (S10) family signature 346 359 IPR001563 GO:0004185|GO:0006508
Seca6g03261 379 Gene3D alpha/beta hydrolase 123 237 IPR029058 -
Seca6g03261 379 Gene3D - 238 378 - -
Seca6g03261 379 Pfam Serine carboxypeptidase 40 123 IPR001563 GO:0004185|GO:0006508
Seca6g03261 379 Pfam Serine carboxypeptidase 240 375 IPR001563 GO:0004185|GO:0006508
Seca6g03261 379 Gene3D alpha/beta hydrolase 24 122 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03261 Seca-Chr6 99313916 99321379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03261 237 379 Calmodulin-binding Proteins AT2G22960 36.364 5.54e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03261 K16296 - gmx:100791997 501.901