Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03227 ATGGTTGAACACCACATGACCTTCTCCCTTTCTCGTAGCTTCGATGATGACTTCTCAAACCAACACACTCCCAATTTCCCTGGTAGCGGTGGAGAGGGGTCCTCCTTTTACTGGCAACCGCCACCCTCCATAATCCCTCCTCCTCCCCACCACCAGGTAGCTCCGCCACCATCGGCTAAGCCACGTGGCAAACCCCCAGGTTCCAAAAACAAGCCAAAGCCACCGCTTGTGATCACCCAAACCAACGAGCAAGACATGAAACCTATGGTGATCCATGTGGACCCAGGTGTAGACGTGATGGAAGCCATTATTAACTATGCTCACAACCACAACCCTGTTGTTTCCTATTCTCCTTCTTCTGCTTTCACCCTTCATGGATCCTTTACTTAG 390 0.5103 MVEHHMTFSLSRSFDDDFSNQHTPNFPGSGGEGSSFYWQPPPSIIPPPPHHQVAPPPSAKPRGKPPGSKNKPKPPLVITQTNEQDMKPMVIHVDPGVDVMEAIINYAHNHNPVVSYSPSSAFTLHGSFT. 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03227 129 MobiDBLite consensus disorder prediction 13 86 - -
Seca6g03227 129 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 50 112 IPR014476 GO:0003680
Seca6g03227 129 MobiDBLite consensus disorder prediction 13 32 - -
Seca6g03227 129 MobiDBLite consensus disorder prediction 40 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03227 Seca-Chr6 98835123 98835512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03227 57 115 AT-hook Motif Nuclear Localized (AHL) Family AT1G20900 42.373 1.94e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03227 - - adu:107463674 76.6405