Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03204 ATGGGCTCACTTCCAAAGAGACCATATTCTCCGACATCTCACCATCTCAATATGCTACAACAAGTCTATAATGGCAATGATTCAACAAATTTCCTAATTCATAGTTACAAAAGAAGCTTTAATGGGTTTGCTGCCATGCTAAGTGATGAACAAGTGGACAAGCTAACTCTAATTGAAGGCGTTGTCTCAGTTTTCCCAAGTAAAACTCTTCAACCACATACAACAAAATATTGGGACTTTATGGGATTTCCAGAGTCAGTTAAACGAAACCAAACAGCTGAGAGTGATGTTATTATTGGAGGTATTGACTCTGGTGTTTGGCCAGAATCAGAGAGTTTCAGTGATCATAATTTTGGTCCCATTCCCAAAAAGTGGAAGGGTACTTGTGCAGGTGGCAAAAATTTCACTTGCAACAAGAAGATTGTCGGAGCTCGGTTTTATGCTGATGATTCTGCTAGAGATGGTGATGGCCATGGAAGCCATACAGCATCAATAGCAGCAGGAAACCAGATAGTTTTATGTGGTTATCATGATGATGAAATTCAAGCTTATGTTGAAAACGCAAGTGGTATAGTCCAAGAGGTAGACGACGAAGATTTTATAGTCAATGTTACTCCATTACCTTATATGGTGTTGTCTTCCCATGACTATGCAAATGTCATGTCCTACAAAAATTCAACAAAAGATCCAAAAGGCGAAATACTCAAGAGTGATACAGTTGAAGATGATACAGCCCCTATTGTAGCTGAGTTTTCCTCACGTGGACCAAATAGTAAAGTTCCAGAAATTTTGAAACCAGATATCACTGCACCTGGAATTTTATCTGGAACATCTATGTCTTGTCCCCATGTTGCTGGAATAGCTGCATATGTGAAAACTTTTCATTTGGATTGGTCACCGGCGGCCATCAAATCTTCTATCATGACTTCAGCACGACCCATGAATGTTTATAAGGATCAAATTGGTGAATATGCTTATGGATCAGGGCATGTCAATCCTTTGCAAGCTATCAATCCTGGTCTTATTTATGACATTGGGAGGGATGATTATATGCAAATGCTTTGCAATTTGGGTTATGATAATAAAAAAATCAAAAGCATATCTGGTGAAAATGTGATCTGCTCCACAACTCCTGATAGATCCTTAGTAAGAAATCTGAATTATCCTGCACTTGTCATTGGAGTTCAGCCCAAGGCATCTTTTTGTGTATTGTTTAATAGAACAGTCACAAATGTTGGGTCAGCAAACTCAAATTACAAGGCAACTGTCTTACCAAATCCAAAAATCAACATTAAGGTGGAACCAGAGATTCTATCCTTCAAATCATTGAATGAGAAGAAGTCTTATGTTGTCACTATCATTGGTGGGGAATTACCAAGTAAAACTGTTCTCATCTCATCACTGATATGGTCAGATGGCACCCATAATGTGCGTAGTCCAATTGTTGTCAATGTTTCTAGTTAG 1464 0.3852 MGSLPKRPYSPTSHHLNMLQQVYNGNDSTNFLIHSYKRSFNGFAAMLSDEQVDKLTLIEGVVSVFPSKTLQPHTTKYWDFMGFPESVKRNQTAESDVIIGGIDSGVWPESESFSDHNFGPIPKKWKGTCAGGKNFTCNKKIVGARFYADDSARDGDGHGSHTASIAAGNQIVLCGYHDDEIQAYVENASGIVQEVDDEDFIVNVTPLPYMVLSSHDYANVMSYKNSTKDPKGEILKSDTVEDDTAPIVAEFSSRGPNSKVPEILKPDITAPGILSGTSMSCPHVAGIAAYVKTFHLDWSPAAIKSSIMTSARPMNVYKDQIGEYAYGSGHVNPLQAINPGLIYDIGRDDYMQMLCNLGYDNKKIKSISGENVICSTTPDRSLVRNLNYPALVIGVQPKASFCVLFNRTVTNVGSANSNYKATVLPNPKINIKVEPEILSFKSLNEKKSYVVTIIGGELPSKTVLISSLIWSDGTHNVRSPIVVNVSS. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03204 487 Gene3D - 354 486 - -
Seca6g03204 487 Pfam Peptidase inhibitor I9 10 71 IPR010259 -
Seca6g03204 487 Gene3D - 172 241 - -
Seca6g03204 487 SUPERFAMILY Subtilisin-like 13 366 IPR036852 GO:0004252|GO:0006508
Seca6g03204 487 ProSiteProfiles Serine proteases, subtilase domain profile. 1 337 - -
Seca6g03204 487 Pfam Fibronectin type-III domain 385 483 IPR041469 -
Seca6g03204 487 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 170 483 IPR045051 -
Seca6g03204 487 Pfam Subtilase family 244 329 IPR000209 GO:0006508|GO:0008236
Seca6g03204 487 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Seca6g03204 487 PRINTS Subtilisin serine protease family (S8) signature 275 291 IPR015500 -
Seca6g03204 487 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Seca6g03204 487 FunFam Subtilisin-like protease SBT1.5 354 486 - -
Seca6g03204 487 ProSitePatterns Serine proteases, subtilase family, serine active site. 276 286 IPR023828 -
Seca6g03204 487 Gene3D Peptidase S8/S53 domain 242 273 IPR036852 GO:0004252|GO:0006508
Seca6g03204 487 Gene3D Peptidase S8/S53 domain 96 171 IPR036852 GO:0004252|GO:0006508
Seca6g03204 487 Gene3D Peptidase S8/S53 domain 274 350 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03204 Seca-Chr6 98543734 98545761 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03204 170 483 Subtilisin-like Serine Gene Family AT5G59100 46.821 2.76e-93 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03204 - - lang:109363627 451.44