Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g03201 ATGTCTTGTCCCCATATTGCTGGAGTAGCTGCATATGTGAAATCTCTATACTTTAATTGGTCACCAGCAGCCATCAAATCTGCTATTATGACTACAGCACAACCCATGAAGAGTTCTTCTAAGGATTATGTTGGTGAATATGCTTATGGATCAGGGCATGTCAATCCTAATCAAGCTATTAATCCTGGTCTTATTTATGACATTGGAATGGAGGGTTATATACAAATGTTATGCAATTTGGGTTATGCAGATGAAAAAATCGAAAGCATATTTGGTGAAAACATTCCTTGCACCGGAGCTTCTGATAGATCCTTAGCAAGGAATTTGAATTATCCTGCCCTTGCCATTGAAGTTCCACCCGAGGCATCTTTCAGTGTTAGATTTCACAGAACGGTCACAAATGTGGGGTTAACAAACTCAATTTATAAGGCAACAATCTCACCAACTCCACAAATCAACATCACCGTGGAACCAGAGATTTTGTCTTTTAAATCATTGAATGAGAAGCAATCTTTTGTTGTCACCATCACCGATGGTAAATTACCAAATGAAACAGTACTCAACTCATCATTCATATGGTCAGATGGAACTCATAATGTACGAAGTCCTATTATTGTGAATATTTCTGATTAA 633 0.376 MSCPHIAGVAAYVKSLYFNWSPAAIKSAIMTTAQPMKSSSKDYVGEYAYGSGHVNPNQAINPGLIYDIGMEGYIQMLCNLGYADEKIESIFGENIPCTGASDRSLARNLNYPALAIEVPPEASFSVRFHRTVTNVGLTNSIYKATISPTPQINITVEPEILSFKSLNEKQSFVVTITDGKLPNETVLNSSFIWSDGTHNVRSPIIVNISD. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g03201 210 FunFam Subtilisin-like protease SBT1.5 77 209 - -
Seca6g03201 210 Gene3D - 77 209 - -
Seca6g03201 210 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 206 IPR045051 -
Seca6g03201 210 Gene3D Peptidase S8/S53 domain 1 73 IPR036852 GO:0004252|GO:0006508
Seca6g03201 210 ProSiteProfiles Serine proteases, subtilase domain profile. 1 60 - -
Seca6g03201 210 Pfam Subtilase family 1 38 IPR000209 GO:0006508|GO:0008236
Seca6g03201 210 SUPERFAMILY Subtilisin-like 1 64 IPR036852 GO:0004252|GO:0006508
Seca6g03201 210 Pfam Fibronectin type-III domain 108 206 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g03201 Seca-Chr6 98523028 98523660 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g03201 1 206 Subtilisin-like Serine Gene Family AT5G59100 49.761 4.20e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g03201 - - lang:109338864 265.003